RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 TGFB3P10600 412 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 IGFBP4P22692 258 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 HOXC8P31273 242 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
TREM2-201ENST00000338469 TAP1Q03518 808 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 FUT2Q10981 343 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 UBE2SQ16763 222 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 HERC6Q8IVU3 1022 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 CAGE1Q8TC20 777 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 AFAP1L1Q8TED9 768 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 GPR20Q99678 358 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 RNPEPQ9H4A4 650 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 MLXIPQ9HAP2 919 aa13.28□□□□□ -0.28
TREM2-201ENST00000338469 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
TREM2-201ENST00000338469 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 TREHO43280 583 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 CDKL5O76039 1030 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 COL9A1P20849 921 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 PTK7Q13308 1070 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
TREM2-201ENST00000338469 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.29
TREM2-201ENST00000338469 RRP36Q96EU6 259 aaKnown RBP13.27□□□□□ -0.29
TREM2-201ENST00000338469 GAS2L1Q99501 681 aaPredicted RBP13.27□□□□□ -0.29
TREM2-201ENST00000338469 H3BRB1 525 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 SMIM10L2AP0DMW4 78 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 SMIM10L2BP0DMW5 78 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 IFNAR1P17181 557 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 ITGB5P18084 799 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 ADAM17P78536 824 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 NTRK3Q16288 839 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.26□□□□□ -0.29
TREM2-201ENST00000338469 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 PHOSPHO2Q8TCD6 241 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 SYMPKQ92797 1274 aaKnown RBP13.26□□□□□ -0.29
TREM2-201ENST00000338469 SLC9A7Q96T83 725 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 LLPHQ9BRT6 129 aaKnown RBP13.26□□□□□ -0.29
TREM2-201ENST00000338469 TUT1Q9H6E5 874 aaKnown RBP13.26□□□□□ -0.29
TREM2-201ENST00000338469 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
TREM2-201ENST00000338469 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.26□□□□□ -0.29
TREM2-201ENST00000338469 MYH15Q9Y2K3 1946 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 GSTTP1A0A1W2PQM5 241 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 LPXNO60711 386 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 HSP90AA1P07900 732 aaKnown RBP13.25□□□□□ -0.29
TREM2-201ENST00000338469 ACTN1P12814 892 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 KCNA2P16389 499 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
TREM2-201ENST00000338469 SP4Q02446 784 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
TREM2-201ENST00000338469 CUL4AQ13619 759 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 METTL7BQ6UX53 244 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 TRIM22Q8IYM9 498 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 CYP2W1Q8TAV3 490 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 PHKBQ93100 1093 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 KATNAL1Q9BW62 490 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 UBIAD1Q9Y5Z9 338 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 MTCH2Q9Y6C9 303 aa13.25□□□□□ -0.29
TREM2-201ENST00000338469 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 FIBPO43427 364 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 BAIAP3O94812 1187 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 CTDNEP1O95476 244 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 THPOP40225 353 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 TRAF1Q13077 416 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 TJAP1Q5JTD0 557 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
TREM2-201ENST00000338469 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 CNKSR3Q6P9H4 555 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 NSUN7Q8NE18 718 aaKnown RBP13.24□□□□□ -0.29
TREM2-201ENST00000338469 DBF4BQ8NFT6 615 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 ARNTL2Q8WYA1 636 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 ATP6V0A1Q93050 837 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 ZBTB10Q96DT7 871 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 SENP7Q9BQF6 1050 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
TREM2-201ENST00000338469 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 SEC63Q9UGP8 760 aaKnown RBP13.24□□□□□ -0.29
TREM2-201ENST00000338469 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
TREM2-201ENST00000338469 C17orf102A2RUQ5 167 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 TNFRSF10AO00220 468 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
TREM2-201ENST00000338469 PPFIA3O75145 1194 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 STAM2O75886 525 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
TREM2-201ENST00000338469 HMGN5P82970 282 aaKnown RBP13.23□□□□□ -0.29
TREM2-201ENST00000338469 TFF2Q03403 129 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 NEDD9Q14511 834 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 FAM117BQ6P1L5 589 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
TREM2-201ENST00000338469 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms