RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 DHX38Q92620 1227 aaKnown RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRKN-201ENST00000338468 AGO4Q9HCK5 861 aaKnown RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 H3BRB1 525 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 M0R2N6 131 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 TNFRSF10AO00220 468 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 ACRP10323 421 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 HOXC8P31273 242 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 TMEM240Q5SV17 173 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 NIPA1Q7RTP0 329 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 USP38Q8NB14 1042 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 GTF3C6Q969F1 213 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 TIFAQ96CG3 184 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 SCLYQ96I15 445 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 ZNF576Q9H609 170 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 TUT1Q9H6E5 874 aaKnown RBP17.4■□□□□ 0.38
PRKN-201ENST00000338468 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
PRKN-201ENST00000338468 FDPSP14324 419 aaKnown RBP17.39■□□□□ 0.37
PRKN-201ENST00000338468 TCF7P36402 384 aaPredicted RBP17.39■□□□□ 0.37
PRKN-201ENST00000338468 NLRP5P59047 1200 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 UTP14CQ5TAP6 766 aaKnown RBP17.39■□□□□ 0.37
PRKN-201ENST00000338468 RASIP1Q5U651 963 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 DAGLBQ8NCG7 672 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 WNT8BQ93098 351 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 IL23AQ9NPF7 189 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 GJB4Q9NTQ9 266 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 PCDHA4Q9UN74 947 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 NFASCO94856 1347 aa17.39■□□□□ 0.37
PRKN-201ENST00000338468 TANC1Q9C0D5 1861 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 RBAK-RBAKDNI3L0D1 243 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 CDKL5O76039 1030 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 SMIM10L2AP0DMW4 78 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 SMIM10L2BP0DMW5 78 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 TRIM71Q2Q1W2 868 aaKnown RBP17.38■□□□□ 0.37
PRKN-201ENST00000338468 ZNF365Q70YC5 407 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 SEPT1Q8WYJ6 367 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 LENG9Q96B70 501 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 PCYT2Q99447 389 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 GAS2L1Q99501 681 aaPredicted RBP17.38■□□□□ 0.37
PRKN-201ENST00000338468 JPH1Q9HDC5 661 aaPredicted RBP17.38■□□□□ 0.37
PRKN-201ENST00000338468 KCNJ14Q9UNX9 436 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 TRIP12Q14669 1992 aaPredicted RBP17.38■□□□□ 0.37
PRKN-201ENST00000338468 SCN5AQ14524 2016 aa17.38■□□□□ 0.37
PRKN-201ENST00000338468 DHX15O43143 795 aaKnown RBP17.37■□□□□ 0.37
PRKN-201ENST00000338468 IQCF3P0C7M6 154 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 CIITAP33076 1130 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 ZNF76P36508 570 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 RBM25P49756 843 aaKnown RBP17.37■□□□□ 0.37
PRKN-201ENST00000338468 RBL2Q08999 1139 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 PLA2G4DQ86XP0 818 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 BLIDQ8IZY5 108 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 FAM177A1Q8N128 213 aaPredicted RBP17.37■□□□□ 0.37
PRKN-201ENST00000338468 NSUN7Q8NE18 718 aaKnown RBP17.37■□□□□ 0.37
PRKN-201ENST00000338468 UIMC1Q96RL1 719 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 PHF20Q9BVI0 1012 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 C22orf23Q9BZE7 217 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 RNPEPQ9H4A4 650 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 ORC3Q9UBD5 711 aaPredicted RBP17.37■□□□□ 0.37
PRKN-201ENST00000338468 SLC9A2Q9UBY0 812 aa17.37■□□□□ 0.37
PRKN-201ENST00000338468 LGR5O75473 907 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 CCNE2O96020 404 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 COL9A1P20849 921 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 ACTR2P61160 394 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 ADAM17P78536 824 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 PTK7Q13308 1070 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 GPNMBQ14956 572 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 TRAF7Q6Q0C0 670 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 CAGE1Q8TC20 777 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
PRKN-201ENST00000338468 C17orf102A2RUQ5 167 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 TREHO43280 583 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 JAK2O60674 1132 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 ATG7O95352 703 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 CKBP12277 381 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 BFSP2Q13515 415 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 GALNT17Q6IS24 598 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 PSRC1Q6PGN9 363 aaPredicted RBP17.35■□□□□ 0.37
PRKN-201ENST00000338468 SERINC5Q86VE9 423 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 TBCKQ8TEA7 893 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 ATXN2LQ8WWM7 1075 aaKnown RBP17.35■□□□□ 0.37
PRKN-201ENST00000338468 HERVK_113Q902F9 699 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 SETD4Q9NVD3 440 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
PRKN-201ENST00000338468 ZNF215Q9UL58 517 aaPredicted RBP17.35■□□□□ 0.37
PRKN-201ENST00000338468 EMSYQ7Z589 1322 aa17.35■□□□□ 0.37
PRKN-201ENST00000338468 IPO5O00410 1097 aaKnown RBP17.34■□□□□ 0.37
PRKN-201ENST00000338468 USP11P51784 963 aa17.34■□□□□ 0.37
PRKN-201ENST00000338468 PRR16Q569H4 304 aa17.34■□□□□ 0.37
PRKN-201ENST00000338468 RETREG2Q8NC44 543 aa17.34■□□□□ 0.37
PRKN-201ENST00000338468 OXER1Q8TDS5 423 aa17.34■□□□□ 0.37
PRKN-201ENST00000338468 AFAP1L1Q8TED9 768 aa17.34■□□□□ 0.37
PRKN-201ENST00000338468 LMBR1Q8WVP7 490 aa17.34■□□□□ 0.37
PRKN-201ENST00000338468 THEGQ9P2T0 379 aa17.34■□□□□ 0.37
PRKN-201ENST00000338468 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms