RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CCDC127Q96BQ5 260 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 ETNK1Q9HBU6 452 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 RGL1Q9NZL6 768 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 UNC13BO14795 1591 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 GYPCP04921 128 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 MSH2P43246 934 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 KCNQ4P56696 695 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 FKBP3Q00688 224 aaKnown RBP17.4■□□□□ 0.38
NPHP3-201ENST00000337331 DLGAP5Q15398 846 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 CERKLQ49MI3 558 aaPredicted RBP17.4■□□□□ 0.38
NPHP3-201ENST00000337331 APBB1IPQ7Z5R6 666 aaPredicted RBP17.4■□□□□ 0.38
NPHP3-201ENST00000337331 PICK1Q9NRD5 415 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 EHD2Q9NZN4 543 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 E9PCH4 1651 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 ICA1Q05084 483 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.4■□□□□ 0.38
NPHP3-201ENST00000337331 MIER3Q7Z3K6 550 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 TMEM165Q9HC07 324 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 LAD1O00515 517 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 PPFIA2O75334 1257 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 NR2F2P24468 414 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 ANKRD20A8PQ5CZ79 823 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 RETREG2Q8NC44 543 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 HDAC7Q8WUI4 952 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 PAGE5Q96GU1 130 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 DYDC2Q96IM9 177 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 AK8Q96MA6 479 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 PRPF3O43395 683 aaKnown RBP17.39■□□□□ 0.37
NPHP3-201ENST00000337331 USP17L8P0C7I0 530 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 PTPREP23469 700 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 TRAPPC11Q7Z392 1133 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 SLFN12Q8IYM2 578 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 PPM1KQ8N3J5 372 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 MSL3Q8N5Y2 521 aaKnown RBP17.39■□□□□ 0.37
NPHP3-201ENST00000337331 ZNF483Q8TF39 744 aaPredicted RBP17.39■□□□□ 0.37
NPHP3-201ENST00000337331 DEUP1Q05D60 604 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 FAM47EQ6ZV65 393 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 PIGBQ92521 554 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 TAF1DQ9H5J8 278 aaPredicted RBP17.39■□□□□ 0.37
NPHP3-201ENST00000337331 INTUQ9ULD6 942 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 SEMA3EO15041 775 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
NPHP3-201ENST00000337331 AP1M1Q9BXS5 423 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
NPHP3-201ENST00000337331 THRAP3Q9Y2W1 955 aaKnown RBP17.39■□□□□ 0.37
NPHP3-201ENST00000337331 UPP2O95045 317 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 PSMC4P43686 418 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 FYB2Q5VWT5 728 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 BZW1Q7L1Q6 419 aaKnown RBP17.38■□□□□ 0.37
NPHP3-201ENST00000337331 NLRX1Q86UT6 975 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 MS4A14Q96JA4 679 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 SNX12Q9UMY4 172 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 SH3BP1Q9Y3L3 701 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 CCNE1P24864 410 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 EIF4A3P38919 411 aaKnown RBP17.38■□□□□ 0.37
NPHP3-201ENST00000337331 MAN2A1Q16706 1144 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 PHLDB3Q6NSJ2 640 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 USP17L2Q6R6M4 530 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 SPATA24Q86W54 205 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 TBC1D10CQ8IV04 446 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 IWS1Q96ST2 819 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 MAP3K4Q9Y6R4 1608 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 PPP2R5EQ16537 467 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.37
NPHP3-201ENST00000337331 MDM1Q8TC05 714 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
NPHP3-201ENST00000337331 ZBED4O75132 1171 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 PRPF6O94906 941 aaKnown RBP17.38■□□□□ 0.37
NPHP3-201ENST00000337331 PLEKHA8P1O95397 391 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 ERVK-24P63145 666 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 ZBED6P86452 979 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 TCP11X2Q5H9J9 407 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 RAB3IL1Q8TBN0 382 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 NUDCD1Q96RS6 583 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 RWDD2AQ9UIY3 292 aa17.38■□□□□ 0.37
NPHP3-201ENST00000337331 ABCC12Q96J65 1359 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 CCDC189A1A4V9 331 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 PSMD14O00487 310 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 NOP56O00567 594 aaKnown RBP17.37■□□□□ 0.37
NPHP3-201ENST00000337331 HAUS1Q96CS2 278 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 PIGSQ96S52 555 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 PARP2Q9UGN5 583 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
NPHP3-201ENST00000337331 TESPA1A2RU30 521 aaPredicted RBP17.37■□□□□ 0.37
NPHP3-201ENST00000337331 IGF2BP3O00425 579 aaKnown RBP eCLIP17.37■□□□□ 0.37
NPHP3-201ENST00000337331 ALAS1P13196 640 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 CDC27P30260 824 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 HSPA1LP34931 641 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 RPS6KA3P51812 740 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 HLFQ16534 295 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 GDAP1Q8TB36 358 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 COA7Q96BR5 231 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms