RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FGFR4P22455 802 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 HSD17B3P37058 310 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 FKBP3Q00688 224 aaKnown RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 KLC1Q07866 573 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 TBX2Q13207 712 aaPredicted RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 KRT25Q7Z3Z0 450 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 REXO1Q8N1G1 1221 aaKnown RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 BICD1Q96G01 975 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 LY9Q9HBG7 655 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 PIH1D3Q9NQM4 214 aaKnown RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 PANK4Q9NVE7 773 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 FRMD4BQ9Y2L6 1034 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 CROCC2H7BZ55 1655 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 FSBPO95073 299 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 BAG3O95817 575 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 CYP2J2P51589 502 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 PMS2P54278 862 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 HERVK_113P62684 666 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 CASKIN2Q8WXE0 1202 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 LPIN2Q92539 896 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 HPSEQ9Y251 543 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
COL2A1-201ENST00000337299 ATP6V1G2O95670 118 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 BRAFP15056 766 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 ZNF18P17022 549 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 CA4P22748 312 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 NR2F2P24468 414 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 ADCY2Q08462 1091 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 TTMPQ5BVD1 217 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 THEMIS2Q5TEJ8 643 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 LRRC34Q8IZ02 419 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 LCORLQ8N3X6 602 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 ATP6V0A4Q9HBG4 840 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.36□□□□□ -0.11
COL2A1-201ENST00000337299 PPFIA2O75334 1257 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 UBE3CQ15386 1083 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 SLC17A8Q8NDX2 589 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 CCDC87Q9NVE4 849 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 STOML1Q9UBI4 398 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 ITIH6Q6UXX5 1313 aa14.36□□□□□ -0.11
COL2A1-201ENST00000337299 A0A0G2JND7 137 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 PPP1R3GB7ZBB8 358 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 PDE8AO60658 829 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 SERPINB4P48594 390 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 DPYDQ12882 1025 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 ANKRD40Q6AI12 368 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 CTAGE3PQ8IX95 158 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 TGS1Q96RS0 853 aaKnown RBP14.35□□□□□ -0.11
COL2A1-201ENST00000337299 PAPOLBQ9NRJ5 636 aaKnown RBP14.35□□□□□ -0.11
COL2A1-201ENST00000337299 CCDC188H7C350 402 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 TRPA1O75762 1119 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 CEP120Q8N960 986 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 TTC1Q99614 292 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 COL4A3BPQ9Y5P4 624 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 CEP152O94986 1710 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 ABCA6Q8N139 1617 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 A0A1W2PQC6 194 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 ANKRD20A8PQ5CZ79 823 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 HAUS3Q68CZ6 603 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 PNMA1Q8ND90 353 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 LARP4BQ92615 738 aaKnown RBP14.35□□□□□ -0.11
COL2A1-201ENST00000337299 LRRC37BQ96QE4 947 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 RHBDL2Q9NX52 303 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL2A1-201ENST00000337299 ZNF711Q9Y462 761 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 EXOC3O60645 756 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 HNRNPCP07910 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL2A1-201ENST00000337299 BMP6P22004 513 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 CCND1P24385 295 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 CLUL1Q15846 466 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 PAPD7Q5XG87 772 aaKnown RBP14.35□□□□□ -0.11
COL2A1-201ENST00000337299 PIP4K2CQ8TBX8 421 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 PARD3BQ8TEW8 1205 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 CARD10Q9BWT7 1032 aa14.35□□□□□ -0.11
COL2A1-201ENST00000337299 ADGRB3O60242 1522 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 ATF2P15336 505 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 DEUP1Q05D60 604 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 GREM2Q9H772 168 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 ZBTB21Q9ULJ3 1066 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 ABCC12Q96J65 1359 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 MAPK13O15264 365 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 COPB2P35606 906 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 STRN3Q13033 797 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 LAMB3Q13751 1172 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 TRAPPC3LQ5T215 181 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 CUEDC2Q9H467 287 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 TULP4Q9NRJ4 1543 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 GYG2O15488 501 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 MCAMP43121 646 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 PSMC4P43686 418 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 PLCB4Q15147 1175 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 HP1BP3Q5SSJ5 553 aaPredicted RBP14.34□□□□□ -0.11
COL2A1-201ENST00000337299 SYNE4Q8N205 404 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 ANKRD35Q8N283 1001 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 PIGBQ92521 554 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms