RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 SH2B1Q9NRF2 756 aaPredicted RBP16.85■□□□□ 0.29
TSPO-201ENST00000329563 KLF18A0A0U1RQI7 1052 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 ADAMTS3O15072 1205 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 ZBTB43O43298 467 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 EFCAB14O75071 495 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 ARHGEF15O94989 841 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 CA3P07451 260 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 RCAN1P53805 252 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 PTK7Q13308 1070 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 RTN1Q16799 776 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 ZNF274Q96GC6 653 aaPredicted RBP16.84■□□□□ 0.29
TSPO-201ENST00000329563 PCDHA6Q9UN73 950 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 PCDHA8Q9Y5H6 950 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 UBIAD1Q9Y5Z9 338 aa16.84■□□□□ 0.29
TSPO-201ENST00000329563 H3BRB1 525 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 K7ELQ4 463 aaPredicted RBP16.83■□□□□ 0.28
TSPO-201ENST00000329563 KCNA2P16389 499 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 SP4Q02446 784 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 APOBRQ0VD83 1088 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 NEDD9Q14511 834 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 XRRA1Q6P2D8 792 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 TMCO2Q7Z6W1 182 aaPredicted RBP16.83■□□□□ 0.28
TSPO-201ENST00000329563 SERINC5Q86VE9 423 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 HERC6Q8IVU3 1022 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 MICALL1Q8N3F8 863 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 PGBD1Q96JS3 809 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 OSBPL7Q9BZF2 842 aa16.83■□□□□ 0.28
TSPO-201ENST00000329563 TUT1Q9H6E5 874 aaKnown RBP16.83■□□□□ 0.28
TSPO-201ENST00000329563 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.28
TSPO-201ENST00000329563 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
TSPO-201ENST00000329563 V9GY48 417 aaPredicted RBP16.83■□□□□ 0.28
TSPO-201ENST00000329563 KAT6AQ92794 2004 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 GOLGA8AA7E2F4 631 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 STXBP3O00186 592 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 CXCL10P02778 98 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 SMIM10L2AP0DMW4 78 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 SMIM10L2BP0DMW5 78 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 ADD1P35611 737 aaKnown RBP16.82■□□□□ 0.28
TSPO-201ENST00000329563 CNKSR3Q6P9H4 555 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 CYP2W1Q8TAV3 490 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 GPRASP2Q96D09 838 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 SENP7Q9BQF6 1050 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 ZBED2Q9BTP6 218 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 RNPEPQ9H4A4 650 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 TMEM260Q9NX78 707 aa16.82■□□□□ 0.28
TSPO-201ENST00000329563 EMSYQ7Z589 1322 aa16.81■□□□□ 0.28
TSPO-201ENST00000329563 NOP56O00567 594 aaKnown RBP16.81■□□□□ 0.28
TSPO-201ENST00000329563 TREHO43280 583 aa16.81■□□□□ 0.28
TSPO-201ENST00000329563 TLL1O43897 1013 aa16.81■□□□□ 0.28
TSPO-201ENST00000329563 POU3F3P20264 500 aaPredicted RBP16.81■□□□□ 0.28
TSPO-201ENST00000329563 SKIV2LQ15477 1246 aaKnown RBP16.81■□□□□ 0.28
TSPO-201ENST00000329563 SPRED2Q7Z698 418 aa16.81■□□□□ 0.28
TSPO-201ENST00000329563 PKD2L1Q9P0L9 805 aa16.81■□□□□ 0.28
TSPO-201ENST00000329563 TPCN1Q9ULQ1 816 aa16.81■□□□□ 0.28
TSPO-201ENST00000329563 BRWD1Q9NSI6 2320 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 NID2Q14112 1375 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 SIP14410 1827 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 REV3LO60673 3130 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 CCDC196A0A1B0GTZ2 297 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 ABHD14A-ACY1A0A1B0GW23 586 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 GSTTP1A0A1W2PQM5 241 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 C17orf102A2RUQ5 167 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 SPDYE3A6NKU9 549 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
TSPO-201ENST00000329563 CLK2P49760 499 aaKnown RBP16.8■□□□□ 0.28
TSPO-201ENST00000329563 NAPAP54920 295 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
TSPO-201ENST00000329563 ADAM17P78536 824 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 DEFB103AP81534 67 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
TSPO-201ENST00000329563 NLRX1Q86UT6 975 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 ADAMTS19Q8TE59 1207 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 ARNTL2Q8WYA1 636 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 TMX3Q96JJ7 454 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 SLKQ9H2G2 1235 aaPredicted RBP16.8■□□□□ 0.28
TSPO-201ENST00000329563 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 JADE2Q9NQC1 790 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 SETD4Q9NVD3 440 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
TSPO-201ENST00000329563 CD2BP2O95400 341 aaKnown RBP16.79■□□□□ 0.28
TSPO-201ENST00000329563 TCF7P36402 384 aaPredicted RBP16.79■□□□□ 0.28
TSPO-201ENST00000329563 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
TSPO-201ENST00000329563 MTMR1Q13613 665 aa16.79■□□□□ 0.28
TSPO-201ENST00000329563 IKBKEQ14164 716 aa16.79■□□□□ 0.28
TSPO-201ENST00000329563 PKN1Q16512 942 aa16.79■□□□□ 0.28
TSPO-201ENST00000329563 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
TSPO-201ENST00000329563 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
TSPO-201ENST00000329563 UHRF1Q96T88 793 aaPredicted RBP16.79■□□□□ 0.28
TSPO-201ENST00000329563 NAP1L2Q9ULW6 460 aaPredicted RBP16.79■□□□□ 0.28
TSPO-201ENST00000329563 COG5Q9UP83 839 aa16.79■□□□□ 0.28
TSPO-201ENST00000329563 TCF20Q9UGU0 1960 aaKnown RBP16.78■□□□□ 0.28
TSPO-201ENST00000329563 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
TSPO-201ENST00000329563 EPOPA6NHQ4 379 aa16.78■□□□□ 0.28
TSPO-201ENST00000329563 RFXAPO00287 272 aa16.78■□□□□ 0.28
TSPO-201ENST00000329563 PFKFB2O60825 505 aa16.78■□□□□ 0.28
TSPO-201ENST00000329563 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
TSPO-201ENST00000329563 THPOP40225 353 aa16.78■□□□□ 0.28
TSPO-201ENST00000329563 METAP2P50579 478 aaKnown RBP eCLIP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms