RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 KIAA0753Q2KHM9 967 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 CCDC152Q4G0S7 254 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 RASGEF1CQ8N431 466 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 TBC1D5Q92609 795 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 CHMP6Q96FZ7 201 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 CEP63Q96MT8 703 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 ZNF317Q96PQ6 595 aaPredicted RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 TSG101Q99816 390 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
GINS3-202ENST00000328514 LZTS2Q9BRK4 669 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 TXLNGYQ9BZA5 131 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 LRRC27Q9C0I9 530 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 DCP1AQ9NPI6 582 aaPredicted RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 ABCF2Q9UG63 623 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 MAD2L2Q9UI95 211 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 FBXL5Q9UKA1 691 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 SLC12A4Q9UP95 1085 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 COL4A3BPQ9Y5P4 624 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 A0A087X0T9 212 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 PGRMC1O00264 195 aaKnown RBP12.34□□□□□ -0.43
GINS3-202ENST00000328514 TRIM37O94972 964 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 ATP6V1G2O95670 118 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 FAM228BP0C875 321 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 FKBP3Q00688 224 aaKnown RBP12.34□□□□□ -0.43
GINS3-202ENST00000328514 GRB10Q13322 594 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 SLMAPQ14BN4 828 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 SEPT2Q15019 361 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 SLC35G1Q2M3R5 365 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 KLHL7Q8IXQ5 586 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 HPS3Q969F9 1004 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 PSMD1Q99460 953 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 FAM129AQ9BZQ8 928 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
GINS3-202ENST00000328514 TTC7AQ9ULT0 858 aaPredicted RBP12.34□□□□□ -0.43
GINS3-202ENST00000328514 CFAP73A6NFT4 308 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 F8VZ95 297 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 KCNK3O14649 394 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 KIF3CO14782 793 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 PPFIA2O75334 1257 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
GINS3-202ENST00000328514 MAGOHP61326 146 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 NONOQ15233 471 aaKnown RBP eCLIP12.33□□□□□ -0.44
GINS3-202ENST00000328514 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 PIGWQ7Z7B1 504 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 CPLX4Q7Z7G2 160 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 SLFN11Q7Z7L1 901 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 CCDC197Q8NCU1 140 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 PNMA1Q8ND90 353 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 OR2W6PQ8NHA6 318 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 CUL5Q93034 780 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 CCDC134Q9H6E4 229 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 NOD2Q9HC29 1040 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 FAM114A2Q9NRY5 505 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 NOVA2Q9UNW9 492 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 BZW2Q9Y6E2 419 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 SCN7AQ01118 1682 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 LAMB2P55268 1798 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 CYTH3O43739 400 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 NUDT17P0C025 328 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 UBE4AQ14139 1066 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 ODF2Q5BJF6 829 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 TRIM59Q8IWR1 403 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 ZC3H3Q8IXZ2 948 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 CEP120Q8N960 986 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 LARP4BQ92615 738 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 SCLT1Q96NL6 688 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 PNMA5Q96PV4 448 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 MTMR9Q96QG7 549 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 CRNKL1Q9BZJ0 848 aaKnown RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 NENFQ9UMX5 172 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
GINS3-202ENST00000328514 ZBTB1Q9Y2K1 713 aa12.33□□□□□ -0.44
GINS3-202ENST00000328514 A0A0A6YYK5 440 aaPredicted RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 ATF3P18847 181 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 CLNS1AP54105 237 aaKnown RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 POLR2FP61218 127 aaKnown RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 POU5F1Q01860 360 aaKnown RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 PDIA5Q14554 519 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 ANKS4BQ8N8V4 417 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 NSUN4Q96CB9 384 aaKnown RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 PGM2Q96G03 612 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 SLC4A9Q96Q91 983 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms