RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 P2RX7Q99572 595 aaKnown RBP24.68■■□□□ 1.54
PNKP-201ENST00000322344 JADE2Q9NQC1 790 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 SCN9AQ15858 1988 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 CETN3O15182 167 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 SRGAP2O75044 1071 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 CYP3A4P08684 503 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 SLC9C1Q4G0N8 1177 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 CC2D2BQ6DHV5 1058 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 TDRD3Q9H7E2 651 aaKnown RBP24.68■■□□□ 1.54
PNKP-201ENST00000322344 SNX12Q9UMY4 172 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 RBAK-RBAKDNI3L0D1 243 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 PIK3CDO00329 1044 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 GH2P01242 217 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 USH1GQ495M9 461 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 MAP9Q49MG5 647 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 SFMBT2Q5VUG0 894 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 MSL1Q68DK7 614 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 SUPT20HQ8NEM7 779 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 CAPZA3Q96KX2 299 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 LSM14BQ9BX40 385 aaKnown RBP24.67■■□□□ 1.54
PNKP-201ENST00000322344 ACBD3Q9H3P7 528 aa24.67■■□□□ 1.54
PNKP-201ENST00000322344 LUC7LQ9NQ29 371 aaKnown RBP24.67■■□□□ 1.54
PNKP-201ENST00000322344 SERPING1P05155 500 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 CYP2C19P33261 490 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 ADAM9Q13443 819 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 GIT2Q14161 759 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 FAM83BQ5T0W9 1011 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 HGSNATQ68CP4 663 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 UIMC1Q96RL1 719 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 HERC5Q9UII4 1024 aaKnown RBP24.66■■□□□ 1.54
PNKP-201ENST00000322344 NOL4O94818 638 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 SPATA31C1P0DKV0 1188 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 SNAP25P60880 206 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 CACNB1Q02641 598 aaPredicted RBP24.66■■□□□ 1.54
PNKP-201ENST00000322344 ITIH3Q06033 890 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 RNF10Q8N5U6 811 aaKnown RBP24.66■■□□□ 1.54
PNKP-201ENST00000322344 CCDC155Q8N6L0 562 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 POLR3CQ9BUI4 534 aaPredicted RBP24.66■■□□□ 1.54
PNKP-201ENST00000322344 TRAF3IP3Q9Y228 551 aa24.66■■□□□ 1.54
PNKP-201ENST00000322344 FAM86B1E9PN63 330 aa24.65■■□□□ 1.54
PNKP-201ENST00000322344 FAM86B2P0C5J1 330 aa24.65■■□□□ 1.54
PNKP-201ENST00000322344 AOC3Q16853 763 aa24.65■■□□□ 1.54
PNKP-201ENST00000322344 ZNF572Q7Z3I7 529 aaPredicted RBP24.65■■□□□ 1.54
PNKP-201ENST00000322344 ZHX3Q9H4I2 956 aa24.65■■□□□ 1.54
PNKP-201ENST00000322344 CAPN6Q9Y6Q1 641 aa24.65■■□□□ 1.54
PNKP-201ENST00000322344 MSH4O15457 936 aa24.64■■□□□ 1.54
PNKP-201ENST00000322344 TCP1P17987 556 aaKnown RBP24.64■■□□□ 1.54
PNKP-201ENST00000322344 CASP8Q14790 479 aa24.64■■□□□ 1.54
PNKP-201ENST00000322344 CCDC70Q6NSX1 233 aa24.64■■□□□ 1.54
PNKP-201ENST00000322344 CSRNP1Q96S65 589 aa24.64■■□□□ 1.54
PNKP-201ENST00000322344 MLXIPQ9HAP2 919 aa24.64■■□□□ 1.54
PNKP-201ENST00000322344 SLX4Q8IY92 1834 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 ERCC3P19447 782 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 EPS15P42566 896 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 TDRD12Q587J7 1177 aaKnown RBP24.64■■□□□ 1.53
PNKP-201ENST00000322344 EPM2AIP1Q7L775 607 aaPredicted RBP24.64■■□□□ 1.53
PNKP-201ENST00000322344 FRMD5Q7Z6J6 570 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 ARHGEF10LQ9HCE6 1279 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 NLRC4Q9NPP4 1024 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.64■■□□□ 1.53
PNKP-201ENST00000322344 VAV3Q9UKW4 847 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 PRR12Q9ULL5 1215 aa24.64■■□□□ 1.53
PNKP-201ENST00000322344 CALUO43852 315 aaPredicted RBP24.63■■□□□ 1.53
PNKP-201ENST00000322344 MOCS3O95396 460 aa24.63■■□□□ 1.53
PNKP-201ENST00000322344 ZNF76P36508 570 aa24.63■■□□□ 1.53
PNKP-201ENST00000322344 RAD51AP2Q09MP3 1159 aa24.63■■□□□ 1.53
PNKP-201ENST00000322344 PABPC4Q13310 644 aaKnown RBP eCLIP24.63■■□□□ 1.53
PNKP-201ENST00000322344 KNOP1Q1ED39 458 aaKnown RBP24.63■■□□□ 1.53
PNKP-201ENST00000322344 C7orf43Q8WVR3 580 aa24.63■■□□□ 1.53
PNKP-201ENST00000322344 VIPAS39Q9H9C1 493 aa24.63■■□□□ 1.53
PNKP-201ENST00000322344 TMOD2Q9NZR1 351 aa24.63■■□□□ 1.53
PNKP-201ENST00000322344 HYOU1Q9Y4L1 999 aa24.63■■□□□ 1.53
PNKP-201ENST00000322344 OPLAHO14841 1288 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 NR2F2P24468 414 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 POLR2FP61218 127 aaKnown RBP24.62■■□□□ 1.53
PNKP-201ENST00000322344 PSMC6P62333 389 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 JAG1P78504 1218 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 BMT2Q1RMZ1 405 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 RUBCNQ92622 972 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 REEP2Q9BRK0 252 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 PDE11AQ9HCR9 933 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 ZNF219Q9P2Y4 722 aaPredicted RBP24.62■■□□□ 1.53
PNKP-201ENST00000322344 TSKSQ9UJT2 592 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 CCDC66A2RUB6 948 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 H3BQF6 201 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 PDXKO00764 312 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 GFPT1Q06210 699 aaPredicted RBP24.62■■□□□ 1.53
PNKP-201ENST00000322344 CREG2Q8IUH2 290 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 MMGT1Q8N4V1 131 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 PRMT6Q96LA8 375 aaPredicted RBP24.62■■□□□ 1.53
PNKP-201ENST00000322344 NOX5Q96PH1 765 aa24.62■■□□□ 1.53
PNKP-201ENST00000322344 A0A1W2PRG0 241 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 PDE2AO00408 941 aaPredicted RBP24.61■■□□□ 1.53
PNKP-201ENST00000322344 ZNF185O15231 689 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 EYA4O95677 639 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 STAT2P52630 851 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 SFR1Q86XK3 245 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 PKNOX2Q96KN3 472 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.61■■□□□ 1.53
PNKP-201ENST00000322344 ZCCHC17Q9NP64 241 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms