RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LACRTQ9GZZ8 138 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 VEZTQ9HBM0 779 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 ZNHIT6Q9NWK9 470 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 PCNTO95613 3336 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 RASSF10A6NK89 507 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 NDUFB10O96000 172 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 MYL1P05976 194 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 FNTAP49354 379 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 ARID5AQ03989 594 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 CDAN1Q8IWY9 1227 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 CNPY4Q8N129 248 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 SH3GL2Q99962 352 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 BCAS3Q9H6U6 928 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 NLRC4Q9NPP4 1024 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 DMGDHQ9UI17 866 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 PABPC4Q13310 644 aaKnown RBP eCLIP17.14■□□□□ 0.334e-10■■■□□ 17.1
SHROOM1-201ENST00000319854 MIIPQ5JXC2 388 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 UNC13DQ70J99 1090 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 ANKRD13CQ8N6S4 541 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 AENQ8WTP8 325 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 PSMB7Q99436 277 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 PANK4Q9NVE7 773 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 CEP83Q9Y592 693 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 CCDC174Q6PII3 467 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 GPBP1Q86WP2 473 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 CHMP2AO43633 222 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 PSMC6P62333 389 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 PDCLQ13371 301 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 TRIM14Q14142 442 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 TTMPQ5BVD1 217 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 STRIP1Q5VSL9 837 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 TSEN2Q8NCE0 465 aaKnown RBP17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 CAPN11Q9UMQ6 739 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
SHROOM1-201ENST00000319854 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 MCM3P25205 808 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 ZNF76P36508 570 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 DNA2P51530 1060 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 COASYQ13057 564 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 TBC1D5Q92609 795 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 SLC7A5Q01650 507 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 RRAGAQ7L523 313 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 SH2D3CQ8N5H7 860 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 ACER1Q8TDN7 264 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 NDST4Q9H3R1 872 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 HAUS4Q9H6D7 363 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 CD248Q9HCU0 757 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 CFBP00751 764 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 FAM114A1Q8IWE2 563 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 LRRC1Q9BTT6 524 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 MAGEF1Q9HAY2 307 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 STK17AQ9UEE5 414 aa17.12■□□□□ 0.33
SHROOM1-201ENST00000319854 PLIN4Q96Q06 1357 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 MED24O75448 989 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 PLA2G4BP0C869 781 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 ARHGAP4P98171 946 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 BMP2KQ9NSY1 1161 aaPredicted RBP17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 DONSONQ9NYP3 566 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 SFI1A8K8P3 1242 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 CLK2P49760 499 aaKnown RBP17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 ATP1A2P50993 1020 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 FAM26FQ5R3K3 315 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 FAM184BQ9ULE4 1060 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
SHROOM1-201ENST00000319854 YDJCA8MPS7 323 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 MEIS2O14770 477 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 PPP4R3AQ6IN85 833 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 CENPPQ6IPU0 288 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 CCDC42Q96M95 316 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 DHX36Q9H2U1 1008 aaKnown RBP17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 SMARCAL1Q9NZC9 954 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 PKD2L1Q9P0L9 805 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 SMCHD1A6NHR9 2005 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 PDIA5Q14554 519 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 VWA3BQ502W6 1294 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 KCTD16Q68DU8 428 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 BANK1Q8NDB2 785 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 DNAJC7Q99615 494 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 A0A1W2PQC6 194 aa17.1■□□□□ 0.33
SHROOM1-201ENST00000319854 FAM86B1E9PN63 330 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms