RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CPSF6Q16630 551 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMCO3-201ENST00000316048 ARHGAP44Q17R89 818 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 DSEQ9UL01 958 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 GSC2O15499 205 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 H2AFB2P0C5Z0 115 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 PF4V1P10720 104 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 MVKQ03426 396 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 PRKCQQ04759 706 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 SPIRE1Q08AE8 756 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 SPRED2Q7Z698 418 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 TCEAL8Q8IYN2 117 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 LZTR1Q8N653 840 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 MAGEB6Q8N7X4 407 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 USP33Q8TEY7 942 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 FAXDC2Q96IV6 333 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 CCDC136Q96JN2 1154 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 PCIF1Q9H4Z3 704 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 TNFRSF10DQ9UBN6 386 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 ADGRE2Q9UHX3 823 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 ZBTB21Q9ULJ3 1066 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 NESP48681 1621 aa5.28□□□□□ -1.56
SMCO3-201ENST00000316048 FGD5Q6ZNL6 1462 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 SLC27A2O14975 620 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 DGKIO75912 1065 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 CD8BP10966 210 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 HTRA3P83110 453 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 TMEM132BQ14DG7 1078 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 TIGD5Q53EQ6 642 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 RTF1Q92541 710 aaKnown RBP5.27□□□□□ -1.57
SMCO3-201ENST00000316048 PMM1Q92871 262 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 CHST12Q9NRB3 414 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMCO3-201ENST00000316048 COA3Q9Y2R0 106 aaPredicted RBP5.27□□□□□ -1.57
SMCO3-201ENST00000316048 B3GALT1Q9Y5Z6 326 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 ERICH3Q5RHP9 1530 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 DNMBPQ6XZF7 1577 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 PRXQ9BXM0 1461 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 RAPGEF2Q9Y4G8 1499 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 E2F8A0AVK6 867 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 RASSF10A6NK89 507 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 DYRK3O43781 588 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 KDM1AO60341 852 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 PROCP04070 461 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 GPR3P46089 330 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 HK2P52789 917 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 ERVFC1P60507 584 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 ZP2Q05996 745 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 ZNF174Q15697 407 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 FIGNQ5HY92 759 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 NXNQ6DKJ4 435 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 PNMA8AQ86V59 439 aaPredicted RBP5.27□□□□□ -1.57
SMCO3-201ENST00000316048 UHMK1Q8TAS1 419 aaKnown RBP5.27□□□□□ -1.57
SMCO3-201ENST00000316048 PANK1Q8TE04 598 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 SLC6A20Q9NP91 592 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 WASHC2AQ641Q2 1341 aa5.27□□□□□ -1.57
SMCO3-201ENST00000316048 CUX2O14529 1486 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 A0A1W2PQ45 241 aaPredicted RBP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 A0A1W2PQY0 241 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 FAM90A27PA6NNH2 459 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 XPOTO43592 962 aaKnown RBP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 SNUPNO95149 360 aaKnown RBP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 CCND1P24385 295 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 PHC1P78364 1004 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 RASSF3Q86WH2 238 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 CPA6Q8N4T0 437 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 NUP43Q8NFH3 380 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 LMBR1Q8WVP7 490 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 ZNF496Q96IT1 587 aaPredicted RBP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 LRGUKQ96M69 825 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 SLC13A1Q9BZW2 595 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 SP110Q9HB58 689 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 ANLNQ9NQW6 1124 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 CCM2LQ9NUG4 571 aaPredicted RBP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 MKS1Q9NXB0 559 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 TMEM59LQ9UK28 342 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 SPEF1Q9Y4P9 236 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 CLIP1P30622 1438 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 TOPBP1Q92547 1522 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 FAM181BA6NEQ2 426 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 GOLGA8AA7E2F4 631 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 GOLGA8BA8MQT2 603 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 VSTM5A8MXK1 200 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 KIF3BO15066 747 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 HIP1RO75146 1068 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 RFPL1O75677 317 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 ZRANB2O95218 330 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 CT47B1P0C2W7 299 aaPredicted RBP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 PRKCAP17252 672 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 CATSPEREQ5SY80 951 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 STEAP3Q658P3 488 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 KCTD1Q719H9 257 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 BCL7CQ8WUZ0 217 aaPredicted RBP5.26□□□□□ -1.57
SMCO3-201ENST00000316048 DLG3Q92796 817 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 TIFAQ96CG3 184 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 ALPK1Q96QP1 1244 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 ZDHHC5Q9C0B5 715 aa5.26□□□□□ -1.57
SMCO3-201ENST00000316048 C19orf44Q9H6X5 657 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms