RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CALM1P0DP23 149 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 CALM2P0DP24 149 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 CALM3P0DP25 149 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 LIFRP42702 1097 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 HIC1Q14526 733 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 NECTIN1Q15223 517 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 PCNX4Q63HM2 1172 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 TRAF7Q6Q0C0 670 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 USP17L6PQ6QN14 398 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 METTL7BQ6UX53 244 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 CYFIP1Q7L576 1253 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 SERINC5Q86VE9 423 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 SRBD1Q8N5C6 995 aaKnown RBP9.38□□□□□ -0.91
TPM3-203ENST00000312970 ARNTL2Q8WYA1 636 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 ATP6V0A1Q93050 837 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 INPP4AQ96PE3 977 aaPredicted RBP9.38□□□□□ -0.91
TPM3-203ENST00000312970 RAD9AQ99638 391 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 ESYT1Q9BSJ8 1104 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 MYL10Q9BUA6 226 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 RNPEPQ9H4A4 650 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 PSTPIP2Q9H939 334 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 MTCH2Q9Y6C9 303 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 USP34Q70CQ2 3546 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 COL4A4P53420 1690 aaPredicted RBP9.38□□□□□ -0.91
TPM3-203ENST00000312970 FRMPD4Q14CM0 1322 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 EMSYQ7Z589 1322 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 RSPH10B2B2RC85 870 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
TPM3-203ENST00000312970 LGALS2P05162 132 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 RSPH10BP0C881 870 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 GNAT1P11488 350 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 THPOP40225 353 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 AAK1Q2M2I8 961 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 NLRX1Q86UT6 975 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
TPM3-203ENST00000312970 FANCBQ8NB91 859 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 GIMAP8Q8ND71 665 aaPredicted RBP9.37□□□□□ -0.91
TPM3-203ENST00000312970 FBXO22Q8NEZ5 403 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.91
TPM3-203ENST00000312970 WNT8BQ93098 351 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 GPR20Q99678 358 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 SENP7Q9BQF6 1050 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 C11orf16Q9NQ32 467 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 SLC12A7Q9Y666 1083 aa9.37□□□□□ -0.91
TPM3-203ENST00000312970 EPOPA6NHQ4 379 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 TREHO43280 583 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 LGR5O75473 907 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 GJB5O95377 273 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 PLEKHA8P1O95397 391 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 SMIM10L2AP0DMW4 78 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 SMIM10L2BP0DMW5 78 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 HOXC8P31273 242 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 DEFB103AP81534 67 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 SEMA3FQ13275 785 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 MBTPS1Q14703 1052 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 SKIV2LQ15477 1246 aaKnown RBP9.36□□□□□ -0.91
TPM3-203ENST00000312970 TCTN1Q2MV58 587 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 SYNE3Q6ZMZ3 975 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 TMCO2Q7Z6W1 182 aaPredicted RBP9.36□□□□□ -0.91
TPM3-203ENST00000312970 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
TPM3-203ENST00000312970 DBF4BQ8NFT6 615 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 ANO2Q9NQ90 1003 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 SETD4Q9NVD3 440 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 LMCD1Q9NZU5 365 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
TPM3-203ENST00000312970 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
TPM3-203ENST00000312970 LCHNA4D1U4 455 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 MAFGO15525 162 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 ATP9AO75110 1047 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 CAND2O75155 1236 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 AMHP03971 560 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 RXRAP19793 462 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 GRB10Q13322 594 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 CAMK2BQ13554 666 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 PLEKHG4Q58EX7 1191 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 TMEM31Q5JXX7 168 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 UTP14CQ5TAP6 766 aaKnown RBP9.35□□□□□ -0.91
TPM3-203ENST00000312970 RNF20Q5VTR2 975 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
TPM3-203ENST00000312970 KRT40Q6A162 431 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.914e-6■□□□□ 9.7
TPM3-203ENST00000312970 SGMS1Q86VZ5 419 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 PARP9Q8IXQ6 854 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
TPM3-203ENST00000312970 GPRASP2Q96D09 838 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 CDHR1Q96JP9 859 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 TGS1Q96RS0 853 aaKnown RBP9.35□□□□□ -0.91
TPM3-203ENST00000312970 COG5Q9UP83 839 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 INSL6Q9Y581 213 aa9.35□□□□□ -0.91
TPM3-203ENST00000312970 NRCAMQ92823 1304 aa9.34□□□□□ -0.91
TPM3-203ENST00000312970 hCG_1642624A0A1W2PR95 340 aa9.34□□□□□ -0.91
TPM3-203ENST00000312970 LINC01553A4QN01 128 aa9.34□□□□□ -0.91
TPM3-203ENST00000312970 FAM86C2PA6NEL3 165 aa9.34□□□□□ -0.91
TPM3-203ENST00000312970 SPDYE3A6NKU9 549 aa9.34□□□□□ -0.91
TPM3-203ENST00000312970 LPXNO60711 386 aa9.34□□□□□ -0.91
TPM3-203ENST00000312970 ITGB5P18084 799 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms