RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 A0A1B0GTH6 734 aa9.52□□□□□ -0.88
COL6A5-202ENST00000312481 TBX3O15119 743 aa9.52□□□□□ -0.88
COL6A5-202ENST00000312481 TFDP1Q14186 410 aa9.52□□□□□ -0.88
COL6A5-202ENST00000312481 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.88
COL6A5-202ENST00000312481 CACYBPQ9HB71 228 aaKnown RBP9.52□□□□□ -0.88
COL6A5-202ENST00000312481 DDX56Q9NY93 547 aaKnown RBP9.52□□□□□ -0.88
COL6A5-202ENST00000312481 CAPN11Q9UMQ6 739 aa9.52□□□□□ -0.88
COL6A5-202ENST00000312481 STAM2O75886 525 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 PRPSAP1Q14558 356 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 TSHZ3Q63HK5 1081 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 UPF3AQ9H1J1 476 aaKnown RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 BAZ2AQ9UIF9 1905 aaKnown RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 ERCC6L2Q5T890 1561 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 TTC4O95801 387 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 INHBAP08476 426 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 ZNF174Q15697 407 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 SYCP2LQ5T4T6 812 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 CCDC25Q86WR0 208 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 OSBPL9Q96SU4 736 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 SH3GL3Q99963 347 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 RPLP2P05387 115 aaKnown RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 APOA4P06727 396 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 KRT7P08729 469 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 FAM160B2Q86V87 743 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 MKNK1Q9BUB5 465 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 MTMR7Q9Y216 660 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 ZMYM2Q9UBW7 1377 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 KDM6AO15550 1401 aaPredicted RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 COL3A1P02461 1466 aaPredicted RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 MAP3K7O43318 606 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 TBC1D8O95759 1140 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 GCKP35557 465 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 RASSF7Q02833 373 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 MAPK6Q16659 721 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 PNMA8AQ86V59 439 aaPredicted RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 NT5C1BQ96P26 610 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 GTPBP10A4D1E9 387 aaKnown RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 HSPA2P54652 639 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 TPD52P55327 224 aaPredicted RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 MAPRE2Q15555 327 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 RABL6Q3YEC7 729 aaPredicted RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 MIER3Q7Z3K6 550 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 GPBP1Q86WP2 473 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 ATL2Q8NHH9 583 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 TMOD1P28289 359 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 CRB1P82279 1406 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 ADAM9Q13443 819 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 KRR1Q13601 381 aaKnown RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 PALM2Q8IXS6 379 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 ZNF710Q8N1W2 664 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 FAM167AQ96KS9 214 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 LSM14BQ9BX40 385 aaKnown RBP9.52□□□□□ -0.89
COL6A5-202ENST00000312481 TEKT3Q9BXF9 490 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 PICK1Q9NRD5 415 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 SYNPO2Q9UMS6 1093 aa9.52□□□□□ -0.89
COL6A5-202ENST00000312481 NPHP4O75161 1426 aaPredicted RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 CCDC160A6NGH7 325 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 H2AFYO75367 372 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 AGTP01019 485 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 MTA1Q13330 715 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 KLC3Q6P597 504 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 ZNF677Q86XU0 584 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 DNAJC17Q9NVM6 304 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 MRPS35P82673 323 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 DTX3LQ8TDB6 740 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 EPN3Q9H201 632 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 NHEJ1Q9H9Q4 299 aaPredicted RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 ADD3Q9UEY8 706 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 CAPN15O75808 1086 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 SERPINB10P48595 397 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 RPS8P62241 208 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 KPNB1Q14974 876 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 FAM160B1Q5W0V3 765 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 MYCT1Q8N699 235 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 MICAL1Q8TDZ2 1067 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 DDX27Q96GQ7 796 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 NDST4Q9H3R1 872 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 GEMIN8Q9NWZ8 242 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 NINQ8N4C6 2090 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 GMNCA6NCL1 334 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 ASAP2O43150 1006 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 TNNC2P02585 160 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 NOP14P78316 857 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 AZI2Q9H6S1 392 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 ATP2C1P98194 919 aaPredicted RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 DR1Q01658 176 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 MAP3K10Q02779 954 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 FBXO38Q6PIJ6 1188 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 ACCSQ96QU6 501 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 PARD6BQ9BYG5 372 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
COL6A5-202ENST00000312481 PITPNM2Q9BZ72 1349 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 SFNP31947 248 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 ATP6V1G3Q96LB4 118 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 LRRC37BQ96QE4 947 aa9.51□□□□□ -0.89
COL6A5-202ENST00000312481 KLRF2D3W0D1 207 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms