RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PCSK9Q8NBP7 692 aaKnown RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 RDM1Q8NG50 284 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF512BQ96KM6 892 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 PAIP2Q9BPZ3 127 aaKnown RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 SMARCAL1Q9NZC9 954 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 RNF40O75150 1001 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 DNAJC8O75937 253 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 STAG3L1P0CL83 205 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 HSPA1LP34931 641 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 STAT3P40763 770 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 DNA2P51530 1060 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ADAM9Q13443 819 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 SNX17Q15036 470 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 SDE2Q6IQ49 451 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 FAM76AQ8TAV0 307 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 PIDD1Q9HB75 910 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ZSWIM6Q9HCJ5 1215 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 TCP10L2B9ZVM9 353 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ZBTB5O15062 677 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 BUB1BO60566 1050 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 EFCAB14O75071 495 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 TJP3O95049 919 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 CYBBP04839 570 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 MAGEA1P43355 309 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 WASHC5Q12768 1159 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 FAM43BQ6ZT52 329 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 SIX6OS1Q8N1H7 587 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF579Q8NAF0 562 aaKnown RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 MTFR1LQ9H019 292 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 OSBPL5Q9H0X9 879 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 DNAI1Q9UI46 699 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ANGPTL3Q9Y5C1 460 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 SAR1BQ9Y6B6 198 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 CD4P01730 458 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 RARBP10826 455 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 GPSM2P81274 684 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 HAUS6Q7Z4H7 955 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 GLT1D1Q96MS3 346 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 EFHD1Q9BUP0 239 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 MRPL4Q9BYD3 311 aaKnown RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 GCOM2Q9BZD3 368 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 TRIM35Q9UPQ4 493 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ZKSCAN5Q9Y2L8 839 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 MYH13Q9UKX3 1938 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 A0A1B0GUA9 196 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 DPYSL4O14531 572 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ENTPD3O75355 529 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 KRT15P19012 456 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 PSMA3P25788 255 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 CAV1Q03135 178 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 PRKCQQ04759 706 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 PTPAQ15257 358 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 PCBP1Q15365 356 aaKnown RBP eCLIP3.45□□□□□ -1.86
CLOCK-201ENST00000309964 KRT40Q6A162 431 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 CCDC121Q6ZUS5 278 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 SUCLG2Q96I99 432 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 RMDN3Q96TC7 470 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 GREM2Q9H772 168 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 ACAD9Q9H845 621 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 CYP26B1Q9NR63 512 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 SYNPO2Q9UMS6 1093 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 HYOU1Q9Y4L1 999 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 TTLL3Q9Y4R7 772 aa3.45□□□□□ -1.86
CLOCK-201ENST00000309964 NKRFO15226 690 aaKnown RBP eCLIP3.44□□□□□ -1.86
CLOCK-201ENST00000309964 PRPF3O43395 683 aaKnown RBP3.44□□□□□ -1.86
CLOCK-201ENST00000309964 ABL1P00519 1130 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 CALB1P05937 261 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 TGFB3P10600 412 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 KRT17Q04695 432 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 IQCB1Q15051 598 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 MEI1Q5TIA1 1274 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 RSPH1Q8WYR4 309 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 DRC3Q9H069 523 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 LGR6Q9HBX8 967 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 LSM7Q9UK45 103 aaKnown RBP3.44□□□□□ -1.86
CLOCK-201ENST00000309964 KIAA1024Q9UPX6 916 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 MYH7P12883 1935 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 GSTA1P08263 222 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 GSTA2P09210 222 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 STMN1P16949 149 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 RANBP1P43487 201 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 PEX6Q13608 980 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 NRKQ7Z2Y5 1582 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 STAG1Q8WVM7 1258 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 WRNIP1Q96S55 665 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 NFE2L3Q9Y4A8 694 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 PYGLP06737 847 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 KRT7P08729 469 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 NR2F2P24468 414 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 ARHGDIAP52565 204 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 EIF3BP55884 814 aaKnown RBP3.44□□□□□ -1.86
CLOCK-201ENST00000309964 POLA2Q14181 598 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 DBN1Q16643 649 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 KIAA1755Q5JYT7 1200 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 PPM1KQ8N3J5 372 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 NECAB1Q8N987 351 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 IL17REQ8NFR9 667 aa3.44□□□□□ -1.86
CLOCK-201ENST00000309964 OTUB1Q96FW1 271 aaPredicted RBP3.44□□□□□ -1.86
CLOCK-201ENST00000309964 CDK5RAP1Q96SZ6 601 aaKnown RBP3.44□□□□□ -1.86
CLOCK-201ENST00000309964 MTSS1O43312 755 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms