RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ST3GAL1Q11201 340 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 MORC3Q14149 939 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 KYAT1Q16773 422 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 ANGEL2Q5VTE6 544 aaKnown RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 TTC19Q6DKK2 380 aaPredicted RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 REM2Q8IYK8 340 aaPredicted RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 DNERQ8NFT8 737 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 P2RX5Q93086 422 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 GBP3Q9H0R5 595 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 INCENPQ9NQS7 918 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 FEZ2Q9UHY8 353 aaPredicted RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 MAN1B1Q9UKM7 699 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 PPP1R9AQ9ULJ8 1098 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 CYP3A7-CYP3A51PA0A087WV96 503 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 FZD9O00144 591 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 PPFIA3O75145 1194 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 CYP3A7P24462 503 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 KCNJ6P48051 423 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 GTF2A2P52657 109 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 PNOCQ13519 176 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 ZYXQ15942 572 aaKnown RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 CEP55Q53EZ4 464 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 EAPPQ56P03 285 aaPredicted RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 SMYD5Q6GMV2 418 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 ZNF280DQ6N043 979 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 CYP26C1Q6V0L0 522 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 GUF1Q8N442 669 aaKnown RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 IMPG2Q9BZV3 1241 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 MROH8Q9H579 483 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 RPAP3Q9H6T3 665 aaPredicted RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 C17orf75Q9HAS0 396 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 SPC25Q9HBM1 224 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 RNF146Q9NTX7 359 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 GGA3Q9NZ52 723 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 IFNKQ9P0W0 207 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 BZW2Q9Y6E2 419 aaKnown RBP6.6□□□□□ -1.35
SEC22A-201ENST00000309934 SNED1Q8TER0 1413 aa6.6□□□□□ -1.35
SEC22A-201ENST00000309934 SHTN1A0MZ66 631 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 EYA4O95677 639 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 BCRP11274 1271 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 MYCLP12524 364 aaPredicted RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 RFX1P22670 979 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 ANXA13P27216 316 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 SLC16A2P36021 539 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 STAT3P40763 770 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 FKBP3Q00688 224 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 NAALADL2Q58DX5 795 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 LUZP1Q86V48 1076 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 MSL3Q8N5Y2 521 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 MSANTD4Q8NCY6 345 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 WHAMMQ8TF30 809 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 ZMAT2Q96NC0 199 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 AIFM3Q96NN9 605 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 PARK7Q99497 189 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 SH3GL3Q99963 347 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 NOC4LQ9BVI4 516 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 IQCGQ9H095 443 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 NAV1Q8NEY1 1877 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 QSER1Q2KHR3 1735 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 hCG_1642624A0A1W2PR95 340 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 DDTLA6NHG4 134 aaPredicted RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 ZEB2O60315 1214 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 CHGBP05060 677 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 CIITAP33076 1130 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 CACNB3P54284 484 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 HNRNPH2P55795 449 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 SESN3P58005 492 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 UBXN1Q04323 297 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 NFIAQ12857 509 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 SHC4Q6S5L8 630 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 ZBTB8OSQ8IWT0 167 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 KIFAP3Q92845 792 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 SGSM3Q96HU1 749 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 C12orf42Q96LP6 360 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 DDX4Q9NQI0 724 aaKnown RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 TRAF5O00463 557 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 PLA2G4BP0C869 781 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 PLCG1P19174 1290 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 MATR3P43243 847 aaKnown RBP eCLIP6.59□□□□□ -1.352e-6■■■□□ 19.1
SEC22A-201ENST00000309934 SNX16P57768 344 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 FUT2Q10981 343 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 SPP2Q13103 211 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 LONRF3Q496Y0 759 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 ODR4Q5SWX8 454 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 TMCO3Q6UWJ1 677 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 MICALCLQ6ZW33 695 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 BICD1Q96G01 975 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 CLIC6Q96NY7 704 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 ACCSQ96QU6 501 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 TRIM6Q9C030 488 aaPredicted RBP6.59□□□□□ -1.35
SEC22A-201ENST00000309934 ANKEF1Q9NU02 776 aa6.59□□□□□ -1.35
SEC22A-201ENST00000309934 KRT86O43790 486 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 RHOBTB3O94955 611 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MAPTP10636 758 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SKILP12757 684 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TMOD1P28289 359 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 GUCY1A2P33402 732 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 PSMC5P62195 406 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 CKAP4Q07065 602 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 RAD51AP2Q09MP3 1159 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms