RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 Q4G0T1 1027 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 TMEM199Q8N511 208 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 KAT2BQ92831 832 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 TEKT3Q9BXF9 490 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 PPP1R12CQ9BZL4 782 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 TRPV6Q9H1D0 765 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 TRMT13Q9NUP7 481 aaKnown RBP22.44■■□□□ 1.18
VEGFB-201ENST00000309422 GRIN2DO15399 1336 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 EMSYQ7Z589 1322 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 C17orf102A2RUQ5 167 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 ADAMTS3O15072 1205 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 ITGB3BPQ13352 177 aaPredicted RBP22.43■■□□□ 1.18
VEGFB-201ENST00000309422 LRCH2Q5VUJ6 765 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 ZNF746Q6NUN9 644 aaPredicted RBP22.43■■□□□ 1.18
VEGFB-201ENST00000309422 RETREG2Q8NC44 543 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 OXER1Q8TDS5 423 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 C16orf70Q9BSU1 422 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 GTF2IRD1Q9UHL9 959 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 TBX21Q9UL17 535 aa22.43■■□□□ 1.18
VEGFB-201ENST00000309422 WDR64B1ANS9 1081 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 BAG4O95429 457 aaKnown RBP22.42■■□□□ 1.18
VEGFB-201ENST00000309422 TDP2O95551 362 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 TIMP1P01033 207 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 CD4P01730 458 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 SLC26A2P50443 739 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 FPGSQ05932 587 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 NR5A1Q13285 461 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 TRIM50Q86XT4 487 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 HSCBQ8IWL3 235 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 RIT2Q99578 217 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 HDAC6Q9UBN7 1215 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 NOL7Q9UMY1 257 aaKnown RBP22.42■■□□□ 1.18
VEGFB-201ENST00000309422 TRPC6Q9Y210 931 aa22.42■■□□□ 1.18
VEGFB-201ENST00000309422 CYP3A7-CYP3A51PA0A087WV96 503 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 TRIM43BA6NCK2 446 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 BTBD18B2RXH4 712 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 PSAPP07602 524 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 CYP3A7P24462 503 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 MARK3P27448 753 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 SFNP31947 248 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 PPIGQ13427 754 aaKnown RBP eCLIP22.41■■□□□ 1.188e-9■■□□□ 13.7
VEGFB-201ENST00000309422 PPP4R3AQ6IN85 833 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 SH3RF1Q7Z6J0 888 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 FBXO18Q8NFZ0 1043 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 CAGE1Q8TC20 777 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 BADQ92934 168 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 TRIM43Q96BQ3 446 aaPredicted RBP22.41■■□□□ 1.18
VEGFB-201ENST00000309422 FOXP1Q9H334 677 aaPredicted RBP22.41■■□□□ 1.18
VEGFB-201ENST00000309422 ALPK3Q96L96 1907 aa22.41■■□□□ 1.18
VEGFB-201ENST00000309422 A0A1W2PPC1 479 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 HAS3O00219 553 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 MSH4O15457 936 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 SMIM10L2AP0DMW4 78 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 SMIM10L2BP0DMW5 78 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 GJB2P29033 226 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 JAK3P52333 1124 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 CKAP2LQ8IYA6 745 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 BCAS3Q9H6U6 928 aa22.4■■□□□ 1.18
VEGFB-201ENST00000309422 CHMP2AO43633 222 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 CD2BP2O95400 341 aaKnown RBP22.39■■□□□ 1.18
VEGFB-201ENST00000309422 HSP90AA1P07900 732 aaKnown RBP22.39■■□□□ 1.18
VEGFB-201ENST00000309422 STAT5BP51692 787 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 PPFIA1Q13136 1202 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 MFSD5Q6N075 450 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 SLFN12Q8IYM2 578 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 ATP6V0A1Q93050 837 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 ZNF302Q9NR11 478 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 PCDHA10Q9Y5I2 948 aa22.39■■□□□ 1.18
VEGFB-201ENST00000309422 NRCAMQ92823 1304 aa22.39■■□□□ 1.17
VEGFB-201ENST00000309422 GSTTP1A0A1W2PQM5 241 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 CYP2C9P11712 490 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 BMP8BP34820 402 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 MCTP1Q6DN14 999 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 GDF6Q6KF10 455 aaPredicted RBP22.38■■□□□ 1.17
VEGFB-201ENST00000309422 PDXDC2PQ6P474 469 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 PLPPR4Q7Z2D5 763 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 SLC5A5Q92911 643 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 LENG9Q96B70 501 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 FAM20AQ96MK3 541 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 UIMC1Q96RL1 719 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 GDF15Q99988 308 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 MTIF3Q9H2K0 278 aaKnown RBP22.38■■□□□ 1.17
VEGFB-201ENST00000309422 COLQQ9Y215 455 aaPredicted RBP22.38■■□□□ 1.17
VEGFB-201ENST00000309422 SCN10AQ9Y5Y9 1956 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 K7ELQ4 463 aaPredicted RBP22.38■■□□□ 1.17
VEGFB-201ENST00000309422 PITPNM1O00562 1244 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 TBX3O15119 743 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 NEMFO60524 1076 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 LGR5O75473 907 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 PDCP20941 246 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 PTK7Q13308 1070 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 RDM1Q8NG50 284 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 PPP1R13LQ8WUF5 828 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 FAM167AQ96KS9 214 aa22.38■■□□□ 1.17
VEGFB-201ENST00000309422 NOC4LQ9BVI4 516 aaKnown RBP22.38■■□□□ 1.17
VEGFB-201ENST00000309422 RPLP2P05387 115 aaKnown RBP22.37■■□□□ 1.17
VEGFB-201ENST00000309422 PSRC1Q6PGN9 363 aaPredicted RBP22.37■■□□□ 1.17
VEGFB-201ENST00000309422 MIER3Q7Z3K6 550 aa22.37■■□□□ 1.17
VEGFB-201ENST00000309422 RSPH3Q86UC2 560 aa22.37■■□□□ 1.17
VEGFB-201ENST00000309422 NOSTRINQ8IVI9 506 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms