RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FOSP01100 380 aaPredicted RBP9.32□□□□□ -0.92
CHD6-201ENST00000309279 XBP1P17861 261 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 CACNB2Q08289 660 aaPredicted RBP9.32□□□□□ -0.92
CHD6-201ENST00000309279 ARMCX2Q7L311 632 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 DAGLBQ8NCG7 672 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 VPS37AQ8NEZ2 397 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 BICD2Q8TD16 824 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 CEP89Q96ST8 783 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.32□□□□□ -0.92
CHD6-201ENST00000309279 OSBPL2Q9H1P3 480 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 PXMP2Q9NR77 195 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 LZTS1Q9Y250 596 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 RPTORQ8N122 1335 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 LRRC37A2A6NM11 1700 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 B4DLN1 442 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 ADAMTS3O15072 1205 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 INHAP05111 366 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 CYP2C19P33261 490 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 TRIM32Q13049 653 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 AP3B2Q13367 1082 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 SIM2Q14190 667 aaPredicted RBP9.31□□□□□ -0.92
CHD6-201ENST00000309279 ARHGEF16Q5VV41 709 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 TAF3Q5VWG9 929 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 MFSD14CQ5VZR4 134 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 MCTP2Q6DN12 878 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.31□□□□□ -0.92
CHD6-201ENST00000309279 VSIG10LQ86VR7 867 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 HSCBQ8IWL3 235 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 SH3TC2Q8TF17 1288 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 ZNF333Q96JL9 665 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 PDCD2LQ9BRP1 358 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 IER2Q9BTL4 223 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 KATNBL1Q9H079 304 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 ABHD16BQ9H3Z7 469 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 YY1AP1Q9H869 796 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 GJB4Q9NTQ9 266 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.31□□□□□ -0.92
CHD6-201ENST00000309279 PCDHA4Q9UN74 947 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 KIAA1217Q5T5P2 1943 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 KIAA0100Q14667 2235 aaKnown RBP9.31□□□□□ -0.92
CHD6-201ENST00000309279 MYH7BA7E2Y1 1941 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 SPDYE3A6NKU9 549 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 NR3C2P08235 984 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 ZNF865P0CJ78 1059 aaPredicted RBP9.31□□□□□ -0.92
CHD6-201ENST00000309279 CYBAP13498 195 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 NLRP5P59047 1200 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 UBXN2AP68543 259 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 PGM5Q15124 567 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 UBE2SQ16763 222 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 KANK3Q6NY19 840 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 XRRA1Q6P2D8 792 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 BLIDQ8IZY5 108 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 REXO1Q8N1G1 1221 aaKnown RBP9.31□□□□□ -0.92
CHD6-201ENST00000309279 FBXO18Q8NFZ0 1043 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 CRYGNQ8WXF5 182 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 CHST12Q9NRB3 414 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
CHD6-201ENST00000309279 PCDHA6Q9UN73 950 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 KCNJ14Q9UNX9 436 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 PCDHA8Q9Y5H6 950 aa9.31□□□□□ -0.92
CHD6-201ENST00000309279 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 MMP1P03956 469 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
CHD6-201ENST00000309279 EIF2AK2P19525 551 aaKnown RBP9.3□□□□□ -0.92
CHD6-201ENST00000309279 RRM1P23921 792 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 GJB2P29033 226 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 ATICP31939 592 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 RFC5P40937 340 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 ACVR2BQ13705 512 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 STXBP2Q15833 593 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 SYCP2LQ5T4T6 812 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 PCNX4Q63HM2 1172 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 KRT40Q6A162 431 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 PAF1Q8N7H5 531 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 FAM184AQ8NB25 1140 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 TRPV1Q8NER1 839 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 C8orf76Q96K31 380 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 VTA1Q9NP79 307 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 CNPY2Q9Y2B0 182 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 KIF3AQ9Y496 699 aa9.3□□□□□ -0.92
CHD6-201ENST00000309279 DDX49Q9Y6V7 483 aaKnown RBP9.3□□□□□ -0.92
CHD6-201ENST00000309279 MKI67P46013 3256 aaKnown RBP9.3□□□□□ -0.92
CHD6-201ENST00000309279 SEPT4O43236 478 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 STAM2O75886 525 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 MTA2O94776 668 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 SREBF1P36956 1147 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 MRPS9P82933 396 aaKnown RBP9.29□□□□□ -0.92
CHD6-201ENST00000309279 TRIM29Q14134 588 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 MRPL58Q14197 206 aaKnown RBP9.29□□□□□ -0.92
CHD6-201ENST00000309279 MTFR1Q15390 333 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 PRAMEF19Q5SWL8 479 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 JAKMIP3Q5VZ66 844 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 TAPT1Q6NXT6 567 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 CHPFQ8IZ52 775 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 IL31RAQ8NI17 732 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 TNFRSF25Q93038 417 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 ANO3Q9BYT9 981 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms