RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SYT17Q9BSW7 474 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 BLZF1Q9H2G9 400 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 THAP9Q9H5L6 903 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 KRT86O43790 486 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 RPS12P25398 132 aaKnown RBP11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 TNNI2P48788 182 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 ADCY7P51828 1080 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 CCDC122Q5T0U0 273 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 ARL6IP4Q66PJ3 421 aaKnown RBP11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 IQCEQ6IPM2 695 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 WDR59Q6PJI9 974 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 CCDC170Q8IYT3 715 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 ADSSL1Q8N142 457 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 DAGLBQ8NCG7 672 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 GIMAP7Q8NHV1 300 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 NOC3LQ8WTT2 800 aaKnown RBP11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 DCAF4Q8WV16 495 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 GJA10Q969M2 543 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 PLCD4Q9BRC7 762 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 FBXO28Q9NVF7 368 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 TRIM10Q9UDY6 481 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 GREB1LQ9C091 1923 aaPredicted RBP11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 LTBP3Q9NS15 1303 aa11.4□□□□□ -0.58
APOBEC3F-201ENST00000308521 INPP5BP32019 993 aa11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 CYLC1P35663 651 aaPredicted RBP11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 LONP1P36776 959 aaKnown RBP11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 PRCPP42785 496 aa11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 NEDD9Q14511 834 aa11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 NONOQ15233 471 aaKnown RBP eCLIP11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 NUP58Q9BVL2 599 aa11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 ARHGEF10LQ9HCE6 1279 aa11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 HDAC6Q9UBN7 1215 aa11.4□□□□□ -0.59
APOBEC3F-201ENST00000308521 COBLO75128 1261 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 YBX3P16989 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 LMNB1P20700 586 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 DNM2P50570 870 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 KCNB1Q14721 858 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 RETREG2Q8NC44 543 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 JAKMIP2Q96AA8 810 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 CRACR2AQ9BSW2 395 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 PSTPIP2Q9H939 334 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 PHF20L1A8MW92 1017 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 ENC1O14682 589 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 EDIL3O43854 480 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 MYL1P05976 194 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 ITIH3Q06033 890 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 GBP6Q6ZN66 633 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 ZNF572Q7Z3I7 529 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 ZKSCAN4Q969J2 545 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 MIEF2Q96C03 454 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 FAM210AQ96ND0 272 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 TMX2Q9Y320 296 aa11.39□□□□□ -0.59
APOBEC3F-201ENST00000308521 ANKRD33BA6NCL7 494 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 TTC36A6NLP5 189 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 AGPSO00116 658 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 TDP2O95551 362 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 HNRNPH1P31943 449 aaKnown RBP11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 GGCXP38435 758 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 CDK17Q00537 523 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 SYDE2Q5VT97 1194 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 CCDC70Q6NSX1 233 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 KRT25Q7Z3Z0 450 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 KIAA1328Q86T90 577 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 MICALL1Q8N3F8 863 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 MMGT1Q8N4V1 131 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 FAM76AQ8TAV0 307 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 AENQ8WTP8 325 aaKnown RBP11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 MTMR8Q96EF0 704 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 TTYH3Q9C0H2 523 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 RNF181Q9P0P0 153 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 PRR12Q9ULL5 1215 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 TBC1D12O60347 775 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 NEK8Q86SG6 692 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 SELENOOQ9BVL4 669 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 TSGA10Q9BZW7 698 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 GGA3Q9NZ52 723 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 GPRC5DQ9NZD1 345 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 PCNTO95613 3336 aa11.38□□□□□ -0.59
APOBEC3F-201ENST00000308521 H0YHG0 523 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 SLC37A4O43826 429 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 SRGAP2O75044 1071 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 HOXA13P31271 388 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 TECP42680 631 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 SARNPP82979 210 aaKnown RBP11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 PPFIA1Q13136 1202 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 DTHD1Q6ZMT9 781 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 TBC1D5Q92609 795 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 CUL5Q93034 780 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 P2RX7Q99572 595 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms