RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 DDX20Q9UHI6 824 aaKnown RBP30.55■■■□□ 2.48
HDAC3-201ENST00000305264 WDR81Q562E7 1941 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 LONP1P36776 959 aaKnown RBP30.54■■■□□ 2.48
HDAC3-201ENST00000305264 IRX5P78411 483 aaPredicted RBP30.54■■■□□ 2.48
HDAC3-201ENST00000305264 PDIA5Q14554 519 aa30.54■■■□□ 2.48
HDAC3-201ENST00000305264 TPRNQ4KMQ1 711 aa30.54■■■□□ 2.48
HDAC3-201ENST00000305264 RAB34Q9BZG1 259 aa30.54■■■□□ 2.48
HDAC3-201ENST00000305264 RARBP10826 455 aa30.54■■■□□ 2.48
HDAC3-201ENST00000305264 MIER3Q7Z3K6 550 aa30.54■■■□□ 2.48
HDAC3-201ENST00000305264 AFG1LQ8WV93 481 aa30.54■■■□□ 2.48
HDAC3-201ENST00000305264 GPR20Q99678 358 aa30.54■■■□□ 2.48
HDAC3-201ENST00000305264 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.54■■■□□ 2.48
HDAC3-201ENST00000305264 WDR64B1ANS9 1081 aa30.53■■■□□ 2.48
HDAC3-201ENST00000305264 CSPP1Q1MSJ5 1256 aa30.53■■■□□ 2.48
HDAC3-201ENST00000305264 USP49Q70CQ1 688 aa30.53■■■□□ 2.48
HDAC3-201ENST00000305264 DISC1Q9NRI5 854 aa30.53■■■□□ 2.48
HDAC3-201ENST00000305264 SAMM50Q9Y512 469 aa30.53■■■□□ 2.48
HDAC3-201ENST00000305264 SYNRGQ9UMZ2 1314 aa30.53■■■□□ 2.48
HDAC3-201ENST00000305264 NOP56O00567 594 aaKnown RBP30.52■■■□□ 2.48
HDAC3-201ENST00000305264 SHC4Q6S5L8 630 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 SMAP1Q8IYB5 467 aaPredicted RBP30.52■■■□□ 2.48
HDAC3-201ENST00000305264 PPTC7Q8NI37 304 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 ZNF333Q96JL9 665 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 Q9Y3F1 56 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 GSTTP1A0A1W2PQM5 241 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 JAK3P52333 1124 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 EPSTI1Q96J88 318 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 AK8Q96MA6 479 aa30.52■■■□□ 2.48
HDAC3-201ENST00000305264 ADALQ6DHV7 355 aa30.51■■■□□ 2.47
HDAC3-201ENST00000305264 ZNF579Q8NAF0 562 aaKnown RBP30.51■■■□□ 2.47
HDAC3-201ENST00000305264 SYMPKQ92797 1274 aaKnown RBP30.51■■■□□ 2.47
HDAC3-201ENST00000305264 ARMC5Q96C12 935 aa30.51■■■□□ 2.47
HDAC3-201ENST00000305264 MYADML2A6NDP7 307 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 PGK1P00558 417 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 CCL5P13501 91 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 SFNP31947 248 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 ABHD15Q6UXT9 468 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 MMTAG2Q9BU76 263 aaKnown RBP30.5■■■□□ 2.47
HDAC3-201ENST00000305264 MCOLN1Q9GZU1 580 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 AP5M1Q9H0R1 490 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 XPNPEP3Q9NQH7 507 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 PAK6Q9NQU5 681 aaPredicted RBP30.5■■■□□ 2.47
HDAC3-201ENST00000305264 CTAGE5O15320 804 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 GADD45BO75293 160 aaPredicted RBP30.5■■■□□ 2.47
HDAC3-201ENST00000305264 PRPF40AO75400 957 aaKnown RBP30.5■■■□□ 2.47
HDAC3-201ENST00000305264 ATG7O95352 703 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 TCF7P36402 384 aaPredicted RBP30.5■■■□□ 2.47
HDAC3-201ENST00000305264 LHX8Q68G74 356 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 UPF3AQ9H1J1 476 aaKnown RBP30.5■■■□□ 2.47
HDAC3-201ENST00000305264 PCDHA10Q9Y5I2 948 aa30.5■■■□□ 2.47
HDAC3-201ENST00000305264 MMP3P08254 477 aa30.49■■■□□ 2.47
HDAC3-201ENST00000305264 GJA9P57773 515 aa30.49■■■□□ 2.47
HDAC3-201ENST00000305264 SEPT1Q8WYJ6 367 aa30.49■■■□□ 2.47
HDAC3-201ENST00000305264 EIF2AK1Q9BQI3 630 aaKnown RBP30.49■■■□□ 2.47
HDAC3-201ENST00000305264 MSCO60682 206 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 ADAMTS4O75173 837 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 SUPT20HL2P0C7V6 817 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 BEX3Q00994 111 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 CYP4A11Q02928 519 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 EPHA7Q15375 998 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 CCDC60Q8IWA6 550 aaPredicted RBP30.48■■■□□ 2.47
HDAC3-201ENST00000305264 RDM1Q8NG50 284 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 SNX29Q8TEQ0 813 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 RNF208Q9H0X6 261 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 RGL1Q9NZL6 768 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 A6NJR5 290 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 C6orf222P0C671 652 aaPredicted RBP30.48■■■□□ 2.47
HDAC3-201ENST00000305264 RESP18Q5W5W9 173 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 MIS18BP1Q6P0N0 1132 aa30.48■■■□□ 2.47
HDAC3-201ENST00000305264 FSCN1Q16658 493 aaKnown RBP30.47■■■□□ 2.47
HDAC3-201ENST00000305264 BANK1Q8NDB2 785 aa30.47■■■□□ 2.47
HDAC3-201ENST00000305264 ERMNQ8TAM6 284 aa30.47■■■□□ 2.47
HDAC3-201ENST00000305264 DYDC2Q96IM9 177 aa30.47■■■□□ 2.47
HDAC3-201ENST00000305264 PCYT2Q99447 389 aa30.47■■■□□ 2.47
HDAC3-201ENST00000305264 MYH9P35579 1960 aaKnown RBP30.47■■■□□ 2.47
HDAC3-201ENST00000305264 MED24O75448 989 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 PSAPP07602 524 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 UGCGQ16739 394 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 KRT79Q5XKE5 535 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 TRIM50Q86XT4 487 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 HSD17B14Q9BPX1 270 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 A0A1W2PQ27 194 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 A0A1W2PQ64 194 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 A0A1W2PQD8 194 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 HOXD8P13378 290 aaPredicted RBP30.46■■■□□ 2.47
HDAC3-201ENST00000305264 UBA7P41226 1012 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 CPT1AP50416 773 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 HAUS3Q68CZ6 603 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 CABP7Q86V35 215 aa30.46■■■□□ 2.47
HDAC3-201ENST00000305264 IGKV6D-21A0A0A0MT36 114 aa30.45■■■□□ 2.47
HDAC3-201ENST00000305264 GOLGA6L4A6NEF3 574 aa30.45■■■□□ 2.47
HDAC3-201ENST00000305264 SPATA31C1P0DKV0 1188 aa30.45■■■□□ 2.47
HDAC3-201ENST00000305264 CCT6AP40227 531 aaKnown RBP30.45■■■□□ 2.47
HDAC3-201ENST00000305264 CTTNQ14247 550 aaKnown RBP30.45■■■□□ 2.47
HDAC3-201ENST00000305264 ECM1Q16610 540 aa30.45■■■□□ 2.47
HDAC3-201ENST00000305264 UTP14CQ5TAP6 766 aaKnown RBP30.45■■■□□ 2.47
HDAC3-201ENST00000305264 SWSAP1Q6NVH7 229 aa30.45■■■□□ 2.47
HDAC3-201ENST00000305264 DEFB118Q96PH6 123 aa30.45■■■□□ 2.47
HDAC3-201ENST00000305264 LMBRD1Q9NUN5 540 aa30.45■■■□□ 2.47
HDAC3-201ENST00000305264 WRAP73Q9P2S5 460 aaPredicted RBP30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms