RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 TXKP42681 527 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 XRCC4Q13426 336 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 PDIA5Q14554 519 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 SEPT2Q15019 361 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 SNCBQ16143 134 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 TMEM119Q4V9L6 283 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 FAM228AQ86W67 206 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 OR2W6PQ8NHA6 318 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 GIMAP7Q8NHV1 300 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 DDX12PQ92771 950 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 SEC16BQ96JE7 1060 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 TMEM47Q9BQJ4 181 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 NEUROG2Q9H2A3 272 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 GANQ9H2C0 597 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 ADAMTS1Q9UHI8 967 aa10.36□□□□□ -0.75
LDB2-201ENST00000304523 USP17L3A6NCW0 530 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 USP17L4A6NCW7 530 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 CCDC188H7C350 402 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 SART1O43290 800 aaKnown RBP10.35□□□□□ -0.75
LDB2-201ENST00000304523 ERCC3P19447 782 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 SMARCA1P28370 1054 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 MRPL12P52815 198 aaKnown RBP10.35□□□□□ -0.75
LDB2-201ENST00000304523 RNASE9P60153 205 aaKnown RBP10.35□□□□□ -0.75
LDB2-201ENST00000304523 KLHL30Q0D2K2 578 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 USP17L1Q7RTZ2 530 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 CACNA2D3Q8IZS8 1091 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 DNAJC19Q96DA6 116 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 CNOT8Q9UFF9 292 aaKnown RBP10.35□□□□□ -0.75
LDB2-201ENST00000304523 PGRMC1O00264 195 aaKnown RBP10.35□□□□□ -0.75
LDB2-201ENST00000304523 GHRP10912 638 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 TMOD1P28289 359 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 SCTRP47872 440 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 IFFO1Q0D2I5 559 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 RAPGEF1Q13905 1077 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 LRRC41Q15345 812 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 CALCRLQ16602 461 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 SPDYCQ5MJ68 293 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 TMC3Q7Z5M5 1100 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 ZC3H3Q8IXZ2 948 aaKnown RBP10.35□□□□□ -0.75
LDB2-201ENST00000304523 REXO1Q8N1G1 1221 aaKnown RBP10.35□□□□□ -0.75
LDB2-201ENST00000304523 CCT6BQ92526 530 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 RAPGEF5Q92565 580 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 CDK5RAP3Q96JB5 506 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.35□□□□□ -0.75
LDB2-201ENST00000304523 CENPHQ9H3R5 247 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 SLITRK6Q9H5Y7 841 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 FBXL5Q9UKA1 691 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 SUFUQ9UMX1 484 aa10.35□□□□□ -0.75
LDB2-201ENST00000304523 CDK5RAP2Q96SN8 1893 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 TRAF5O00463 557 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 DNAJC8O75937 253 aaPredicted RBP10.34□□□□□ -0.75
LDB2-201ENST00000304523 TSPY3P0CV98 308 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 TSPY8P0CW00 308 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 KLRK1P26718 216 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 COASYQ13057 564 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 ASIC2Q16515 512 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 IFI16Q16666 785 aaKnown RBP10.34□□□□□ -0.75
LDB2-201ENST00000304523 TMEM266Q2M3C6 531 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 GKAP1Q5VSY0 366 aaPredicted RBP10.34□□□□□ -0.75
LDB2-201ENST00000304523 KCNK18Q7Z418 384 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 DDX42Q86XP3 938 aaKnown RBP eCLIP10.34□□□□□ -0.75
LDB2-201ENST00000304523 RASGEF1CQ8N431 466 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 FAM133AQ8N9E0 248 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 DYNLL2Q96FJ2 89 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.34□□□□□ -0.75
LDB2-201ENST00000304523 RAB34Q9BZG1 259 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.34□□□□□ -0.75
LDB2-201ENST00000304523 MGRN1O60291 552 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 GOLGA8HP0CJ92 632 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 NF2P35240 595 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 CRKLP46109 303 aaKnown RBP10.34□□□□□ -0.75
LDB2-201ENST00000304523 DPY19L2P1Q6NXN4 242 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 C3orf67Q6ZVT6 689 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 SLFN11Q7Z7L1 901 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 CENPTQ96BT3 561 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 TLCD1Q96CP7 247 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 CNOT10Q9H9A5 744 aaKnown RBP10.34□□□□□ -0.75
LDB2-201ENST00000304523 MKNK2Q9HBH9 465 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 ODF2LQ9ULJ1 636 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 TPX2Q9ULW0 747 aaKnown RBP10.34□□□□□ -0.75
LDB2-201ENST00000304523 NENFQ9UMX5 172 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 NOC2LQ9Y3T9 749 aaKnown RBP10.34□□□□□ -0.75
LDB2-201ENST00000304523 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
LDB2-201ENST00000304523 POTEMA6NI47 508 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 hCG_1984214I3L0E3 225 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 SLC37A4O43826 429 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 EDIL3O43854 480 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 CEP104O60308 925 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 DRD4P21917 467 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 ANXA13P27216 316 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 FLT3P36888 993 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 PTK2Q05397 1052 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 FAM26FQ5R3K3 315 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 SOGA3Q5TF21 947 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 KRT79Q5XKE5 535 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 IRF2BP2Q7Z5L9 587 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 METTL13Q8N6R0 699 aa10.33□□□□□ -0.76
LDB2-201ENST00000304523 ZNF713Q8N859 430 aaPredicted RBP10.33□□□□□ -0.76
LDB2-201ENST00000304523 SNX29Q8TEQ0 813 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms