RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 ACTN1P12814 892 aa18.26■□□□□ 0.51
SRGAP2C-201ENST00000304465 RFC2P35250 354 aa18.26■□□□□ 0.51
SRGAP2C-201ENST00000304465 SP4Q02446 784 aa18.26■□□□□ 0.51
SRGAP2C-201ENST00000304465 H3BRB1 525 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 STXBP3O00186 592 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 HAS3O00219 553 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 FOSBP53539 338 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 RESTQ13127 1097 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 SEMA3FQ13275 785 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 MTMR1Q13613 665 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 CCDC12Q8WUD4 166 aaPredicted RBP18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 FTOQ9C0B1 505 aaKnown RBP eCLIP18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 TUT1Q9H6E5 874 aaKnown RBP18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 ZNF215Q9UL58 517 aaPredicted RBP18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 STXBP5LQ9Y2K9 1186 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 MYH15Q9Y2K3 1946 aa18.25■□□□□ 0.51
SRGAP2C-201ENST00000304465 TMEM265A0A087WTH1 108 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 MAFGO15525 162 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 DEXIO95424 95 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 LGALS2P05162 132 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 IQCF3P0C7M6 154 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 SCG2P13521 617 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 DNAJB2P25686 324 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 PFKFB3Q16875 520 aaPredicted RBP18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 TRIM22Q8IYM9 498 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 AFAP1L1Q8TED9 768 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 C8orf76Q96K31 380 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 C16orf70Q9BSU1 422 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 SEMA6BQ9H3T3 888 aa18.24■□□□□ 0.51
SRGAP2C-201ENST00000304465 ITGB5P18084 799 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 MCM4P33991 863 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 GUCY1B3Q02153 619 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 PTK7Q13308 1070 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 AP3B2Q13367 1082 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 UTP14CQ5TAP6 766 aaKnown RBP18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 RASIP1Q5U651 963 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 TYW1BQ6NUM6 668 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 GPR20Q99678 358 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 BCAS3Q9H6U6 928 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 UBIAD1Q9Y5Z9 338 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 SLC4A7Q9Y6M7 1214 aa18.23■□□□□ 0.51
SRGAP2C-201ENST00000304465 C17orf102A2RUQ5 167 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 PARNO95453 639 aaKnown RBP18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 SELPP16109 830 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 RAB30Q15771 203 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 KRT40Q6A162 431 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 TIFAQ96CG3 184 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 ANO3Q9BYT9 981 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 C6orf50Q9HD87 102 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 JADE2Q9NQC1 790 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 PKD2L1Q9P0L9 805 aa18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 CXXC1Q9P0U4 656 aaPredicted RBP18.22■□□□□ 0.51
SRGAP2C-201ENST00000304465 H3BQV1 296 aa18.21■□□□□ 0.51
SRGAP2C-201ENST00000304465 GNAT1P11488 350 aa18.21■□□□□ 0.51
SRGAP2C-201ENST00000304465 ZNF76P36508 570 aa18.21■□□□□ 0.51
SRGAP2C-201ENST00000304465 MCTP2Q6DN12 878 aa18.21■□□□□ 0.51
SRGAP2C-201ENST00000304465 LRRC8DQ7L1W4 858 aa18.21■□□□□ 0.51
SRGAP2C-201ENST00000304465 WASF1Q92558 559 aa18.21■□□□□ 0.51
SRGAP2C-201ENST00000304465 MYH7BA7E2Y1 1941 aa18.21■□□□□ 0.51
SRGAP2C-201ENST00000304465 GRXCR1A8MXD5 290 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 KCNA2P16389 499 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 GNA11P29992 359 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 FAM173BQ6P4H8 233 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 SEPT1Q8WYJ6 367 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 ATP6V0A1Q93050 837 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 PGBD1Q96JS3 809 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 GUCD1Q96NT3 240 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 GBP4Q96PP9 640 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 CTAGE1Q96RT6 745 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 MXRA8Q9BRK3 442 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 PBX4Q9BYU1 374 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 KIF28PB7ZC32 967 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 ATP9AO75110 1047 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 SMIM10L2AP0DMW4 78 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 SMIM10L2BP0DMW5 78 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 CKBP12277 381 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 TCF7P36402 384 aaPredicted RBP18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 ZNF200P98182 395 aaPredicted RBP18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 JAKMIP3Q5VZ66 844 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 CCDC148Q8NFR7 591 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 BICD2Q8TD16 824 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 DHX38Q92620 1227 aaKnown RBP18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 CDX2Q99626 313 aaPredicted RBP18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 SDF4Q9BRK5 362 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 TTYH1Q9H313 450 aaPredicted RBP18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 ZNF576Q9H609 170 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
SRGAP2C-201ENST00000304465 ESYT2A0FGR8 921 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 SREBF1P36956 1147 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 RBL2Q08999 1139 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 NPY5RQ15761 445 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 CEP55Q53EZ4 464 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 TRIM50Q86XT4 487 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 GLG1Q92896 1179 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 ZMYND12Q9H0C1 365 aa18.19■□□□□ 0.5
SRGAP2C-201ENST00000304465 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms