RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 XKR3Q5GH77 459 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 CEP63Q96MT8 703 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 MXRA8Q9BRK3 442 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 SYT17Q9BSW7 474 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 CPVLQ9H3G5 476 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 RASAL2Q9UJF2 1139 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 PPME1Q9Y570 386 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 CTAGE9A4FU28 777 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 INO80B-WBP1J3KQ70 363 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 NR2F2P24468 414 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 KRT9P35527 623 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 RGS2P41220 211 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 EFNA5P52803 228 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 KCNB1Q14721 858 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 DNERQ8NFT8 737 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 OR8K1Q8NGG5 319 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 SEPT1Q8WYJ6 367 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 SMARCAD1Q9H4L7 1026 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 MAN1B1Q9UKM7 699 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 TLR3O15455 904 aaKnown RBP9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 MAGEB2O15479 319 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 STRNO43815 780 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 IGBP1P78318 339 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 FAM186BQ8IYM0 893 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 SYCE1Q8N0S2 351 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 CEP112Q8N8E3 955 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 SMC1BQ8NDV3 1235 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 IPO4Q8TEX9 1081 aaKnown RBP9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 ATG4CQ96DT6 458 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 JADE2Q9NQC1 790 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 TMEM260Q9NX78 707 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 SPEF2Q9C093 1822 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 RGPD2P0DJD1 1756 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 ROBO3Q96MS0 1386 aa9.11□□□□□ -0.95
SNRPD1-201ENST00000300413 UNCXA6NJT0 531 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 K7ERI5 159 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 RFC5P40937 340 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 KLHL30Q0D2K2 578 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 POTEDQ86YR6 584 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 RAET1EQ8TD07 263 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 CDCA5Q96FF9 252 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 MTRQ99707 1265 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 BPIFA3Q9BQP9 254 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 CCDC94Q9BW85 323 aaPredicted RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 IL25Q9H293 177 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 GLTPD2A6NH11 291 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 PLA2G6O60733 806 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 CHGBP05060 677 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 DSG3P32926 999 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 SNRPFP62306 86 aaKnown RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 HOOK3Q86VS8 718 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 CCDC117Q8IWD4 279 aaPredicted RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 CERS5Q8N5B7 392 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 SPATA33Q96N06 139 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 TRMT1Q9NXH9 659 aaKnown RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 NDC80O14777 642 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 NKRFO15226 690 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 ASAP2O43150 1006 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 AFPP02771 609 aaKnown RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 FGRP09769 529 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 VCAM1P19320 739 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 LAMC2Q13753 1193 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 TTC39CQ8N584 583 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 NT5C1BQ96P26 610 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 FAM198AQ9UFP1 575 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 STRCP1A6NGW2 1772 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 UBE4BO95155 1302 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 DGAT1O75907 488 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 MFAP3P55082 362 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 ARID5AQ03989 594 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 CTTNQ14247 550 aaKnown RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 MAPK6Q16659 721 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 KIAA0753Q2KHM9 967 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 INTS8Q75QN2 995 aaKnown RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 EEPD1Q7L9B9 569 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 NIPA1Q7RTP0 329 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 ABI1Q8IZP0 508 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 NLRP7Q8WX94 980 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 EPSTI1Q96J88 318 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 CNOT6LQ96LI5 555 aaKnown RBP9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 MTUS1Q9ULD2 1270 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 COL18A1P39060 1754 aa9.1□□□□□ -0.95
SNRPD1-201ENST00000300413 UBE2Q2LH0YL09 131 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 MYL3P08590 195 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 KRT19P08727 400 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 TXNP10599 105 aaKnown RBP9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 COPB1P53618 953 aaKnown RBP9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 AP3M2P53677 418 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 ZNF746Q6NUN9 644 aaPredicted RBP9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 PLEKHH3Q7Z736 793 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 UIMC1Q96RL1 719 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 EIF2AK1Q9BQI3 630 aaKnown RBP9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 DDX4Q9NQI0 724 aaKnown RBP9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 TDP2O95551 362 aa9.09□□□□□ -0.95
SNRPD1-201ENST00000300413 POLR2BP30876 1174 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms