RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SAMSN1Q9NSI8 373 aaKnown RBP17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 PKD2L1Q9P0L9 805 aa17.51■□□□□ 0.39
HERPUD1-201ENST00000300302 BICDL2A1A5D9 508 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 DHX15O43143 795 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 CETPP11597 493 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 GTF2A2P52657 109 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 PSMC6P62333 389 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 STK4Q13043 487 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 ITGB3BPQ13352 177 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 CST9Q5W186 159 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 GTF3C2Q8WUA4 911 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 GPBP1L1Q9HC44 474 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 PANK4Q9NVE7 773 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 DDX39AO00148 427 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 FCER1AP12319 257 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 MSNP26038 577 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 GNPTABQ3T906 1256 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 CDKAL1Q5VV42 579 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 INPP4AQ96PE3 977 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 NACC1Q96RE7 527 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 CTAGE1Q96RT6 745 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 MOV10L1Q9BXT6 1211 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 SLC39A2Q9NP94 309 aa17.5■□□□□ 0.39
HERPUD1-201ENST00000300302 CNMDO75829 334 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 KRT76Q01546 638 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 SPAG1Q07617 926 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 EHHADHQ08426 723 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 COASYQ13057 564 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 HSP90AA4PQ58FG1 418 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 BHMT2Q9H2M3 363 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 IMPACTQ9P2X3 320 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 ADD3Q9UEY8 706 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 ZKSCAN5Q9Y2L8 839 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 SLC45A1Q9Y2W3 748 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 SAMM50Q9Y512 469 aa17.49■□□□□ 0.39
HERPUD1-201ENST00000300302 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 CCNE1P24864 410 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 SFNP31947 248 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 JAK3P52333 1124 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 STXBP2Q15833 593 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 KIAA0895Q8NCT3 520 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 ANKRD20A12PQ8NF67 263 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 P2RX5Q93086 422 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 LXNQ9BS40 222 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 RBPJLQ9UBG7 517 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 B4DLN1 442 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 PEX10O60683 326 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 ERCC3P19447 782 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 MKRN3Q13064 507 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 ARSHQ5FYA8 562 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 CCDC186Q7Z3E2 898 aa17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 GUF1Q8N442 669 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 NOC3LQ8WTT2 800 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-201ENST00000300302 POTEB2H3BUK9 544 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 EIF3JO75822 258 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 HERC4Q5GLZ8 1057 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 FAM26FQ5R3K3 315 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 RDM1Q8NG50 284 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 PIGOQ8TEQ8 1089 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 TRIM47Q96LD4 638 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 MPHOSPH6Q99547 160 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 MROH8Q9H579 483 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 ZSWIM4Q9H7M6 989 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 RRAGDQ9NQL2 400 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 KCND2Q9NZV8 630 aa17.47■□□□□ 0.39
HERPUD1-201ENST00000300302 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.47■□□□□ 0.392e-7■□□□□ 10.4
HERPUD1-201ENST00000300302 FRMD3A2A2Y4 597 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 WDR64B1ANS9 1081 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 KIF3CO14782 793 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 ATP9AO75110 1047 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 KIF20AO95235 890 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 ALDH5A1P51649 535 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 GIT2Q14161 759 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 BANK1Q8NDB2 785 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 SMCR8Q8TEV9 937 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 MS4A4AQ96JQ5 239 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 THAP9Q9H5L6 903 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 TXNRD2Q9NNW7 524 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 NRBP1Q9UHY1 535 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 LOXHD1Q8IVV2 1947 aa17.46■□□□□ 0.39
HERPUD1-201ENST00000300302 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 NPHP3-ACAD11A0A0J9YXS1 232 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 TRIM49BA6NDI0 452 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 COBLO75128 1261 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 PTGS1P23219 599 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 QARSP47897 775 aaKnown RBP17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 GSDMDP57764 484 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 CNTN2Q02246 1040 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 CCL15Q16663 113 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 ZNF746Q6NUN9 644 aaPredicted RBP17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 TTI2Q6NXR4 508 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 FILIP1Q7Z7B0 1213 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 MYOCDQ8IZQ8 938 aa17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 NAP1L5Q96NT1 182 aaPredicted RBP17.46■□□□□ 0.38
HERPUD1-201ENST00000300302 LCTP09848 1927 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms