RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 UFL1O94874 794 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 ABCB4P21439 1286 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 DYNLL1P63167 89 aaKnown RBP16.25■□□□□ 0.19
SPIDR-201ENST00000297423 RNF217Q8TC41 542 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 ZSCAN10Q96SZ4 725 aaPredicted RBP16.25■□□□□ 0.19
SPIDR-201ENST00000297423 TLR10Q9BXR5 811 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 NHSQ6T4R5 1651 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 PEX26Q7Z412 305 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 THAP9Q9H5L6 903 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 RGS16O15492 202 aaPredicted RBP16.24■□□□□ 0.19
SPIDR-201ENST00000297423 SMIM24O75264 130 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 CCNE1P24864 410 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 KLRC1P26715 233 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 KIF5BP33176 963 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 PACSIN1Q9BY11 444 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
SPIDR-201ENST00000297423 USP17L12C9JPN9 530 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 USP17L21D6R901 530 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 EVI5O60447 810 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 CRYMQ14894 314 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 WHAMMQ8TF30 809 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 MRRFQ96E11 262 aaKnown RBP16.24■□□□□ 0.19
SPIDR-201ENST00000297423 IRAK4Q9NWZ3 460 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 DNAJC17Q9NVM6 304 aaKnown RBP16.24■□□□□ 0.19
SPIDR-201ENST00000297423 GGA1Q9UJY5 639 aa16.24■□□□□ 0.19
SPIDR-201ENST00000297423 UTP11Q9Y3A2 253 aaKnown RBP16.24■□□□□ 0.19
SPIDR-201ENST00000297423 LGR5O75473 907 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 SCG2P13521 617 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 AMPD3Q01432 767 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 TAF11Q15544 211 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 DCAF17Q5H9S7 520 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-201ENST00000297423 ENAHQ8N8S7 591 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-201ENST00000297423 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-201ENST00000297423 TUBGCP6Q96RT7 1819 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 A0A1W2PQC6 194 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 LACTBP83111 547 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-201ENST00000297423 ATP2C1P98194 919 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-201ENST00000297423 ARMC3Q5W041 872 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 BLIDQ8IZY5 108 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 GDAP1Q8TB36 358 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 CUL5Q93034 780 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.196e-7■■■■■ 229.9
SPIDR-201ENST00000297423 SWAP70Q9UH65 585 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 STK36Q9NRP7 1315 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 WTIPA6NIX2 430 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-201ENST00000297423 SPATA20Q8TB22 786 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 TRIM51Q9BSJ1 452 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 TMEM60Q9H2L4 133 aa16.23■□□□□ 0.19
SPIDR-201ENST00000297423 PLSCR1O15162 318 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 VWA3BQ502W6 1294 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 PARD3BQ8TEW8 1205 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 MKNK2Q9HBH9 465 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 ARPP21Q9UBL0 812 aaPredicted RBP16.22■□□□□ 0.19
SPIDR-201ENST00000297423 LRRC10BA6NIK2 292 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 SPDYE3A6NKU9 549 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 BBOX1O75936 387 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 CCDC84Q86UT8 332 aaPredicted RBP16.22■□□□□ 0.19
SPIDR-201ENST00000297423 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
SPIDR-201ENST00000297423 TTI1O43156 1089 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 SART1O43290 800 aaKnown RBP16.22■□□□□ 0.19
SPIDR-201ENST00000297423 ATP6V1G2O95670 118 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 ERFP50548 548 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 NAPAP54920 295 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 MXRA7P84157 204 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 DDR1Q08345 913 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 THEMIS2Q5TEJ8 643 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 PDXDC2PQ6P474 469 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 SH3RF1Q7Z6J0 888 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 STAG1Q8WVM7 1258 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 CHMP6Q96FZ7 201 aa16.22■□□□□ 0.19
SPIDR-201ENST00000297423 PDS5AQ29RF7 1337 aaKnown RBP16.22■□□□□ 0.19
SPIDR-201ENST00000297423 ATP11AP98196 1134 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 SNX1Q13596 522 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 FAM47EQ6ZV65 393 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 IQCKQ8N0W5 287 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 RETREG2Q8NC44 543 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 FGFR1OPO95684 399 aaKnown RBP16.21■□□□□ 0.19
SPIDR-201ENST00000297423 CHN1P15882 459 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 ITGB3BPQ13352 177 aaPredicted RBP16.21■□□□□ 0.19
SPIDR-201ENST00000297423 ASIC2Q16515 512 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 GLE1Q53GS7 698 aaKnown RBP16.21■□□□□ 0.19
SPIDR-201ENST00000297423 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
SPIDR-201ENST00000297423 SV2BQ7L1I2 683 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 SLC17A8Q8NDX2 589 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 CCDC26Q8TAB7 109 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 PSMD1Q99460 953 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 PRMT1Q99873 361 aaKnown RBP16.21■□□□□ 0.19
SPIDR-201ENST00000297423 SNX24Q9Y343 169 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 KLRK1P26718 216 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 CNNM4Q6P4Q7 775 aa16.21■□□□□ 0.19
SPIDR-201ENST00000297423 NOP53Q9NZM5 478 aaKnown RBP16.21■□□□□ 0.19
SPIDR-201ENST00000297423 CNOT8Q9UFF9 292 aaKnown RBP16.21■□□□□ 0.19
SPIDR-201ENST00000297423 LDHBP07195 334 aaKnown RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 MMP10P09238 476 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 FLT3P36888 993 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 POLE2P56282 527 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 RBBP5Q15291 538 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms