RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 CMTR2Q8IYT2 770 aaKnown RBP12.12□□□□□ -0.47
USP41-201ENST00000292729 MIER1Q8N108 512 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 RNF41Q9H4P4 317 aaPredicted RBP12.12□□□□□ -0.47
USP41-201ENST00000292729 EHMT1Q9H9B1 1298 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 ZNF215Q9UL58 517 aaPredicted RBP12.12□□□□□ -0.47
USP41-201ENST00000292729 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
USP41-201ENST00000292729 H0Y858 1186 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
USP41-201ENST00000292729 DHX16O60231 1041 aaKnown RBP12.11□□□□□ -0.47
USP41-201ENST00000292729 ITGB1P05556 798 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 ADAM17P78536 824 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 SP2Q02086 613 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
USP41-201ENST00000292729 TAF2Q6P1X5 1199 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 TICAM2Q86XR7 235 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 SPPL3Q8TCT6 385 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 ESR2Q92731 530 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 RPGRIP1Q96KN7 1286 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 RIPOR3Q96MK2 946 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 AMNQ9BXJ7 453 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 SETD4Q9NVD3 440 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
USP41-201ENST00000292729 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 PRR23AA6NEV1 266 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 SORBS3O60504 671 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 STAM2O75886 525 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 CSPG5O95196 566 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 CHRNA1P02708 482 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 GHRP10912 638 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 DNAJB1P25685 340 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 CCND2P30279 289 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 NBL1P41271 181 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 NRIP1P48552 1158 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 NEDD9Q14511 834 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 ASCL5Q7RTU5 278 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 RSPH3Q86UC2 560 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 IQCA1Q86XH1 822 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 POF1BQ8WVV4 589 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 SUSD6Q92537 303 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 BARX2Q9UMQ3 279 aaPredicted RBP12.1□□□□□ -0.47
USP41-201ENST00000292729 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
USP41-201ENST00000292729 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
USP41-201ENST00000292729 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 MYO10Q9HD67 2058 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 OPLAHO14841 1288 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 KDM4AO75164 1064 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 GLP2RO95838 553 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
USP41-201ENST00000292729 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
USP41-201ENST00000292729 STAG3L1P0CL83 205 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 SRGAP2BP0DMP2 458 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 UBE3AQ05086 875 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 MGAT3Q09327 533 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 TRAF1Q13077 416 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 LPIN1Q14693 890 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 METTL7BQ6UX53 244 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 NPAS4Q8IUM7 802 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 CDCA3Q99618 268 aaPredicted RBP12.09□□□□□ -0.47
USP41-201ENST00000292729 FTHL17Q9BXU8 183 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 TLE6Q9H808 572 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 MYO15AQ9UKN7 3530 aa12.09□□□□□ -0.47
USP41-201ENST00000292729 MX1P20591 662 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 ID4P47928 161 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 HAND2P61296 217 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 MCTP2Q6DN12 878 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 TSHZ1Q6ZSZ6 1077 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 FAM43BQ6ZT52 329 aaPredicted RBP12.08□□□□□ -0.48
USP41-201ENST00000292729 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 RBM23Q86U06 439 aaKnown RBP12.08□□□□□ -0.48
USP41-201ENST00000292729 ATP8B4Q8TF62 1192 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 GPR20Q99678 358 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
USP41-201ENST00000292729 TRIM6-TRIM34B2RNG4 842 aa12.07□□□□□ -0.48
USP41-201ENST00000292729 FNDC1Q4ZHG4 1894 aaPredicted RBP12.07□□□□□ -0.48
USP41-201ENST00000292729 PDE12Q6L8Q7 609 aaKnown RBP12.07□□□□□ -0.48
USP41-201ENST00000292729 CYFIP1Q7L576 1253 aa12.07□□□□□ -0.48
USP41-201ENST00000292729 UBALD2Q8IYN6 164 aa12.07□□□□□ -0.48
USP41-201ENST00000292729 CRIPAKQ8N1N5 446 aa12.07□□□□□ -0.48
USP41-201ENST00000292729 IL31RAQ8NI17 732 aa12.07□□□□□ -0.48
USP41-201ENST00000292729 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
USP41-201ENST00000292729 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
USP41-201ENST00000292729 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms