RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 RIC8AQ9NPQ8 531 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 JADE2Q9NQC1 790 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 TMEM260Q9NX78 707 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 PKD2L1Q9P0L9 805 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 SPDYE3A6NKU9 549 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 RSPH10B2B2RC85 870 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 LGR5O75473 907 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 HMGB1P09429 215 aaKnown RBP10.93□□□□□ -0.66
HMHB1-201ENST00000289448 RSPH10BP0C881 870 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 TCF7P36402 384 aaPredicted RBP10.93□□□□□ -0.66
HMHB1-201ENST00000289448 KCNJ6P48051 423 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 ADCY7P51828 1080 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 NAPAP54920 295 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 MTMR1Q13613 665 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.93□□□□□ -0.66
HMHB1-201ENST00000289448 RUFY4Q6ZNE9 571 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 Q6ZUG5 572 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 DBF4BQ8NFT6 615 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 LMBR1Q8WVP7 490 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 BRF1Q92994 677 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 PCYT2Q99447 389 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 BARHL2Q9NY43 387 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 BRWD1Q9NSI6 2320 aa10.93□□□□□ -0.66
HMHB1-201ENST00000289448 PTPRSQ13332 1948 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 ABHD14A-ACY1A0A1B0GW23 586 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 SMCO2A6NFE2 343 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 TLL1O43897 1013 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 CTSHP09668 335 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 ARP10275 920 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 CLK2P49760 499 aaKnown RBP10.92□□□□□ -0.66
HMHB1-201ENST00000289448 RCAN1P53805 252 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 ARHGAP4P98171 946 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 PKN1Q16512 942 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 PLEKHG4Q58EX7 1191 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 MARCH8Q5T0T0 291 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 KRT40Q6A162 431 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 FAM117BQ6P1L5 589 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 GIMAP8Q8ND71 665 aaPredicted RBP10.92□□□□□ -0.66
HMHB1-201ENST00000289448 ARNTL2Q8WYA1 636 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 SEPT1Q8WYJ6 367 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 ZBTB10Q96DT7 871 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 CDHR1Q96JP9 859 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 MXRA8Q9BRK3 442 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
HMHB1-201ENST00000289448 ZNF215Q9UL58 517 aaPredicted RBP10.92□□□□□ -0.66
HMHB1-201ENST00000289448 NAP1L2Q9ULW6 460 aaPredicted RBP10.92□□□□□ -0.66
HMHB1-201ENST00000289448 NRCAMQ92823 1304 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 KIF28PB7ZC32 967 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 PPFIA3O75145 1194 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 GJB5O95377 273 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 RPS6KB1P23443 525 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 MARK3P27448 753 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 METAP2P50579 478 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMHB1-201ENST00000289448 ITGB3BPQ13352 177 aaPredicted RBP10.91□□□□□ -0.66
HMHB1-201ENST00000289448 IKBKEQ14164 716 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 PFKFB3Q16875 520 aaPredicted RBP10.91□□□□□ -0.66
HMHB1-201ENST00000289448 BLOC1S2Q6QNY1 142 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 FBXL16Q8N461 479 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 ANO3Q9BYT9 981 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 AGXT2Q9BYV1 514 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 MTCH2Q9Y6C9 303 aa10.91□□□□□ -0.66
HMHB1-201ENST00000289448 EMSYQ7Z589 1322 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 hCG_1984214I3L0E3 225 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 MEIS1O00470 390 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 MAFGO15525 162 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 LPXNO60711 386 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 CAND2O75155 1236 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 FOSP01100 380 aaPredicted RBP10.9□□□□□ -0.66
HMHB1-201ENST00000289448 CHRNA1P02708 482 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 GNAT1P11488 350 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 SCG2P13521 617 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 POU3F3P20264 500 aaPredicted RBP10.9□□□□□ -0.66
HMHB1-201ENST00000289448 SREBF1P36956 1147 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 FGD1P98174 961 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 PPFIA1Q13136 1202 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 NTRK3Q16288 839 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 CEP55Q53EZ4 464 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 FAM26DQ5JW98 314 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 JAKMIP3Q5VZ66 844 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 ZNF713Q8N859 430 aaPredicted RBP10.9□□□□□ -0.66
HMHB1-201ENST00000289448 CRYGNQ8WXF5 182 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 GLG1Q92896 1179 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 PHKBQ93100 1093 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 RAD9AQ99638 391 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 ZBED2Q9BTP6 218 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 EHMT1Q9H9B1 1298 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 AGO4Q9HCK5 861 aaKnown RBP10.9□□□□□ -0.66
HMHB1-201ENST00000289448 JPH1Q9HDC5 661 aaPredicted RBP10.9□□□□□ -0.66
HMHB1-201ENST00000289448 SLC9A2Q9UBY0 812 aa10.9□□□□□ -0.66
HMHB1-201ENST00000289448 NID2Q14112 1375 aa10.9□□□□□ -0.67
HMHB1-201ENST00000289448 NFASCO94856 1347 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.89□□□□□ -0.67
HMHB1-201ENST00000289448 MBLAC1A4D2B0 266 aaPredicted RBP10.89□□□□□ -0.67
HMHB1-201ENST00000289448 LINC01553A4QN01 128 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 FAM86B1E9PN63 330 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 EFCAB14O75071 495 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 CCNE2O96020 404 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 FAM86B2P0C5J1 330 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms