RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PPFIBP1Q86W92 1011 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 CEP120Q8N960 986 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 ANKRD42Q8N9B4 389 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 C8orf58Q8NAV2 365 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 NAXEQ8NCW5 288 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 RSPH1Q8WYR4 309 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 LSM14BQ9BX40 385 aaKnown RBP3.32□□□□□ -1.88
HERC4-201ENST00000277817 ZFYVE1Q9HBF4 777 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 PLSCR4Q9NRQ2 329 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 TNPO3Q9Y5L0 923 aaKnown RBP3.32□□□□□ -1.88
HERC4-201ENST00000277817 NPFFR2Q9Y5X5 522 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 KAT6BQ8WYB5 2073 aa3.32□□□□□ -1.88
HERC4-201ENST00000277817 ERICH2A1L162 156 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 C19orf81C9J6K1 198 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 PLOD3O60568 738 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 LETM1O95202 739 aaPredicted RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 TPM3P06753 285 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 SCP2P22307 547 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 RPL6Q02878 288 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 BRD3Q15059 726 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 BMP2KLQ5H9B9 411 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 RRP12Q5JTH9 1297 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 BLOC1S2Q6QNY1 142 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 SRGAP1Q7Z6B7 1085 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 TMTC1Q8IUR5 882 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 VWA5B2Q8N398 1253 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 TSPYL6Q8N831 410 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 PHACTR3Q96KR7 559 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 TREX2Q9BQ50 279 aaPredicted RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 TMEM60Q9H2L4 133 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 BOLA2Q9H3K6 86 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 BLOC1S4Q9NUP1 217 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 ZNF281Q9Y2X9 895 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 RTCBQ9Y3I0 505 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 PPIP5K1Q6PFW1 1433 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 TCRBV16S1A1N1A0A5B0 115 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 RASSF10A6NK89 507 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 FAM155AB1AL88 458 aaPredicted RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 M0R3H8 397 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 CYP2E1P05181 493 aaPredicted RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 HNRNPLP14866 589 aaKnown RBP eCLIP3.31□□□□□ -1.883e-6■■□□□ 11.8
HERC4-201ENST00000277817 SOX18P35713 384 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 GPR3P46089 330 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 MMP14P50281 582 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 ARSDP51689 593 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 NUCB1Q02818 461 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 TJAP1Q5JTD0 557 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 HEATR6Q6AI08 1181 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 TOM1L2Q6ZVM7 507 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 BTLAQ7Z6A9 289 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 TRMT2AQ8IZ69 625 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 PTPN18Q99952 460 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.31□□□□□ -1.88
HERC4-201ENST00000277817 VTA1Q9NP79 307 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 LUC7LQ9NQ29 371 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 MAN1C1Q9NR34 630 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 POLKQ9UBT6 870 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 GIT1Q9Y2X7 761 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 WNT9AO14904 365 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 TGM5O43548 720 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 DHX16O60231 1041 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 KINO60870 393 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 ANXA1P04083 346 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 THBS1P07996 1170 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 ZBTB48P10074 688 aaPredicted RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 RAC2P15153 192 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 AFF1P51825 1210 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 CASP5P51878 434 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 CAMK4Q16566 473 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 ZNF827Q17R98 1081 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 KRT24Q2M2I5 525 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 CCDC158Q5M9N0 1113 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 ZFPM1Q8IX07 1006 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 FAM26EQ8N5C1 309 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 APPL2Q8NEU8 664 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 CNKSR1Q969H4 720 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 ATG4CQ96DT6 458 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 KIF1BPQ96EK5 621 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 DCBLD2Q96PD2 775 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 MEIS3Q99687 375 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 CRISPLD1Q9H336 500 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 C1orf112Q9NSG2 853 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 SUCOQ9UBS9 1254 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 CYP8B1Q9UNU6 501 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 SNCAIPQ9Y6H5 919 aa3.31□□□□□ -1.88
HERC4-201ENST00000277817 EDC4Q6P2E9 1401 aaKnown RBP3.31□□□□□ -1.88
HERC4-201ENST00000277817 SLC22A31A6NKX4 558 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 B4E171 279 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PHACTR2O75167 634 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZPR1O75312 459 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TPM1P09493 284 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CALRP27797 417 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 GPC1P35052 558 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 GRIK1P39086 918 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ME1P48163 572 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CCT5P48643 541 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 IDH3AP50213 366 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 FXR1P51114 621 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERC4-201ENST00000277817 AK2P54819 239 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TYRO3Q06418 890 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms