RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 MTMR1Q13613 665 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 ADGRE1Q14246 886 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 TMCO2Q7Z6W1 182 aaPredicted RBP16.5■□□□□ 0.23
HMGN3-201ENST00000275036 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 TEX2Q8IWB9 1127 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 USP38Q8NB14 1042 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 SLC26A6Q9BXS9 759 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 OSBPL7Q9BZF2 842 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 FTOQ9C0B1 505 aaKnown RBP eCLIP16.5■□□□□ 0.23
HMGN3-201ENST00000275036 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 MSRAQ9UJ68 235 aa16.5■□□□□ 0.23
HMGN3-201ENST00000275036 GSTTP1A0A1W2PQM5 241 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 ESYT2A0FGR8 921 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 TREHO43280 583 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 SREBF1P36956 1147 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 AP3B2Q13367 1082 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 UTP14CQ5TAP6 766 aaKnown RBP16.49■□□□□ 0.23
HMGN3-201ENST00000275036 JAKMIP3Q5VZ66 844 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
HMGN3-201ENST00000275036 CRYGNQ8WXF5 182 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
HMGN3-201ENST00000275036 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 RNF26Q9BY78 433 aaPredicted RBP16.49■□□□□ 0.23
HMGN3-201ENST00000275036 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 EHMT1Q9H9B1 1298 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 PDRG1Q9NUG6 133 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 PCDHA11Q9Y5I1 949 aa16.49■□□□□ 0.23
HMGN3-201ENST00000275036 C17orf102A2RUQ5 167 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 SEC24BO95487 1268 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 ARP10275 920 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 ACTN1P12814 892 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 DEFB103AP81534 67 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 STK3Q13188 491 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 SPRED2Q7Z698 418 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 GIMAP8Q8ND71 665 aaPredicted RBP16.48■□□□□ 0.23
HMGN3-201ENST00000275036 GLT8D2Q9H1C3 349 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 SLC28A3Q9HAS3 691 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 SETD4Q9NVD3 440 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 REV3LO60673 3130 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 TRANK1O15050 2925 aa16.48■□□□□ 0.23
HMGN3-201ENST00000275036 SIP14410 1827 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 MEIS1O00470 390 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 MAFGO15525 162 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 CA3P07451 260 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 TCF7P36402 384 aaPredicted RBP16.47■□□□□ 0.23
HMGN3-201ENST00000275036 WDR5P61964 334 aaKnown RBP16.47■□□□□ 0.23
HMGN3-201ENST00000275036 ADAM17P78536 824 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 ARHGAP4P98171 946 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 PPP2R2DQ66LE6 453 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 RASGRP4Q8TDF6 673 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 ATP6V0A1Q93050 837 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 SLC9A7Q96T83 725 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 VPS54Q9P1Q0 977 aa16.47■□□□□ 0.23
HMGN3-201ENST00000275036 MYH9P35579 1960 aaKnown RBP16.47■□□□□ 0.23
HMGN3-201ENST00000275036 MICAL3Q7RTP6 2002 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 FAM86B1E9PN63 330 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 DLL1O00548 723 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 FAM86B2P0C5J1 330 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 THPOP40225 353 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 ANAPC15P60006 121 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 AKAP17AQ02040 695 aaKnown RBP16.46■□□□□ 0.23
HMGN3-201ENST00000275036 ITGB3BPQ13352 177 aaPredicted RBP16.46■□□□□ 0.23
HMGN3-201ENST00000275036 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
HMGN3-201ENST00000275036 CNKSR3Q6P9H4 555 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 REXO1Q8N1G1 1221 aaKnown RBP16.46■□□□□ 0.23
HMGN3-201ENST00000275036 PHOSPHO2Q8TCD6 241 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
HMGN3-201ENST00000275036 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 IL17RAQ96F46 866 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 PCYT2Q99447 389 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 C6orf50Q9HD87 102 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 LOXHD1Q8IVV2 1947 aa16.46■□□□□ 0.23
HMGN3-201ENST00000275036 CUL9Q8IWT3 2517 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 EPOPA6NHQ4 379 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 EDIL3O43854 480 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 DTNBO60941 627 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 SCRN1Q12765 414 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 AGO4Q9HCK5 861 aaKnown RBP16.45■□□□□ 0.22
HMGN3-201ENST00000275036 JPH1Q9HDC5 661 aaPredicted RBP16.45■□□□□ 0.22
HMGN3-201ENST00000275036 PRDM6Q9NQX0 595 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
HMGN3-201ENST00000275036 TPCN1Q9ULQ1 816 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 NFASCO94856 1347 aa16.45■□□□□ 0.22
HMGN3-201ENST00000275036 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
HMGN3-201ENST00000275036 RSPH10B2B2RC85 870 aa16.44■□□□□ 0.22
HMGN3-201ENST00000275036 RFXAPO00287 272 aa16.44■□□□□ 0.22
HMGN3-201ENST00000275036 CYP3A4P08684 503 aa16.44■□□□□ 0.22
HMGN3-201ENST00000275036 CTSHP09668 335 aa16.44■□□□□ 0.22
HMGN3-201ENST00000275036 RSPH10BP0C881 870 aa16.44■□□□□ 0.22
HMGN3-201ENST00000275036 MARK3P27448 753 aa16.44■□□□□ 0.22
HMGN3-201ENST00000275036 GNA11P29992 359 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms