RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 MYO1CO00159 1063 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 PALMO75781 387 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 FAM228BP0C875 321 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 PSMC6P62333 389 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 RAPGEF1Q13905 1077 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 SLC9C1Q4G0N8 1177 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 SRLQ86TD4 932 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 DNAAF5Q86Y56 855 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 EDEM3Q9BZQ6 932 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 BCAS3Q9H6U6 928 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 KCNMB3Q9NPA1 279 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 TMEM51Q9NW97 253 aa18.44■□□□□ 0.54
PDE4C-201ENST00000262805 RRP15Q9Y3B9 282 aaKnown RBP18.44■□□□□ 0.54
PDE4C-201ENST00000262805 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDE4C-201ENST00000262805 LRRC37AA6NMS7 1700 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 ZSCAN5CA6NGD5 496 aaPredicted RBP18.43■□□□□ 0.54
PDE4C-201ENST00000262805 PPEF1O14829 653 aaPredicted RBP18.43■□□□□ 0.54
PDE4C-201ENST00000262805 SERPING1P05155 500 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 ACTN1P12814 892 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 GPATCH4Q5T3I0 446 aaKnown RBP18.43■□□□□ 0.54
PDE4C-201ENST00000262805 CCDC70Q6NSX1 233 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 FOXR2Q6PJQ5 311 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 FAM133AQ8N9E0 248 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 ATP6V0A2Q9Y487 856 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 MEIS1O00470 390 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 GCFC2P16383 781 aaKnown RBP18.43■□□□□ 0.54
PDE4C-201ENST00000262805 SEPT2Q15019 361 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 CCDC65Q8IXS2 484 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 CEP63Q96MT8 703 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 NT5C3AQ9H0P0 336 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 POLD4Q9HCU8 107 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 BMP2KQ9NSY1 1161 aaPredicted RBP18.43■□□□□ 0.54
PDE4C-201ENST00000262805 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 STIM2Q9P246 746 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 SWAP70Q9UH65 585 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 PCDHA1Q9Y5I3 950 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 KDM3AQ9Y4C1 1321 aa18.43■□□□□ 0.54
PDE4C-201ENST00000262805 POLRMTO00411 1230 aaKnown RBP18.42■□□□□ 0.54
PDE4C-201ENST00000262805 ADRA2BP18089 450 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 SLC12A3P55017 1021 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 ADAM9Q13443 819 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 SKIDA1Q1XH10 827 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 APOBEC3HQ6NTF7 200 aaKnown RBP18.42■□□□□ 0.54
PDE4C-201ENST00000262805 C10orf67Q8IYJ2 551 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 GOLGA6L1Q8N7Z2 621 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDE4C-201ENST00000262805 ANO3Q9BYT9 981 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 ADAMTS1Q9UHI8 967 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 COA1Q9GZY4 146 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 GANQ9H2C0 597 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 KCNQ5Q9NR82 932 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 ATAD5Q96QE3 1844 aa18.42■□□□□ 0.54
PDE4C-201ENST00000262805 QSER1Q2KHR3 1735 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 ESYT3A0FGR9 886 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 ANKRD65E5RJM6 399 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 IVLP07476 585 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 GLI1P08151 1106 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 MARSP56192 900 aaKnown RBP18.41■□□□□ 0.54
PDE4C-201ENST00000262805 RNASE9P60153 205 aaKnown RBP18.41■□□□□ 0.54
PDE4C-201ENST00000262805 TCP10Q12799 353 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 NAB2Q15742 525 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 C8orf74Q6P047 294 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 EHD4Q9H223 541 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 RSPH14Q9UHP6 348 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 SIPA1L1O43166 1804 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 MEIS2O14770 477 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
PDE4C-201ENST00000262805 HOXD13P35453 343 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 PAFAH1B1P43034 410 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 SPIRE1Q08AE8 756 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 KCNH2Q12809 1159 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 CDC37Q16543 378 aaPredicted RBP18.41■□□□□ 0.54
PDE4C-201ENST00000262805 SLC18A3Q16572 532 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 CATSPER3Q86XQ3 398 aa18.41■□□□□ 0.54
PDE4C-201ENST00000262805 RNF10Q8N5U6 811 aaKnown RBP18.41■□□□□ 0.54
PDE4C-201ENST00000262805 SYN2Q92777 582 aaPredicted RBP18.41■□□□□ 0.54
PDE4C-201ENST00000262805 GOLGA6CA6NDK9 693 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 KRT18P05783 430 aaKnown RBP18.4■□□□□ 0.54
PDE4C-201ENST00000262805 GOLGA6DP0CG33 693 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 PABPC4Q13310 644 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDE4C-201ENST00000262805 PRR16Q569H4 304 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 SP8Q8IXZ3 490 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 DHX36Q9H2U1 1008 aaKnown RBP18.4■□□□□ 0.54
PDE4C-201ENST00000262805 GOLPH3Q9H4A6 298 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 GOLGA6AQ9NYA3 693 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 SMCHD1A6NHR9 2005 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 FRMD3A2A2Y4 597 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 SLC9A1P19634 815 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 NR2F2P24468 414 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 KLHL30Q0D2K2 578 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 TRADDQ15628 312 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 KCTD19Q17RG1 926 aaPredicted RBP18.4■□□□□ 0.54
PDE4C-201ENST00000262805 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 DPY19L2P1Q6NXN4 242 aa18.4■□□□□ 0.54
PDE4C-201ENST00000262805 FAM153BP0C7A2 387 aa18.39■□□□□ 0.53
PDE4C-201ENST00000262805 CARSP49589 748 aaKnown RBP18.39■□□□□ 0.53
PDE4C-201ENST00000262805 FAM153CQ494X1 144 aa18.39■□□□□ 0.53
PDE4C-201ENST00000262805 ZC3H3Q8IXZ2 948 aaKnown RBP18.39■□□□□ 0.53
PDE4C-201ENST00000262805 FAM76AQ8TAV0 307 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms