RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 MYBP10242 640 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
SPG11-201ENST00000261866 CYFIP1Q7L576 1253 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 PPFIBP2Q8ND30 876 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 ANGPTL3Q9Y5C1 460 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 GRK7Q8WTQ7 553 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 PHBP35232 272 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 KIF23Q02241 960 aaPredicted RBP13.19□□□□□ -0.3
SPG11-201ENST00000261866 MYO1EQ12965 1108 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 DARS2Q6PI48 645 aaKnown RBP13.19□□□□□ -0.3
SPG11-201ENST00000261866 SPTLC3Q9NUV7 552 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
SPG11-201ENST00000261866 ATP6V1E2Q96A05 226 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 PARVGQ9HBI0 331 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 MX2P20592 715 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 BASP1P80723 227 aaKnown RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 GUCY2DQ02846 1103 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 C2orf54Q08AI8 447 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 KCTD16Q68DU8 428 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 RNF139Q8WU17 664 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 RRAGDQ9NQL2 400 aaPredicted RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 SESN3P58005 492 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 PDCD6IPQ8WUM4 868 aaKnown RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 K7ERI5 159 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 CACNB2Q08289 660 aaPredicted RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 CEP95Q96GE4 821 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 G3BP2Q9UN86 482 aaKnown RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 KIF1BO60333 1816 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 ANKRD20A3Q5VUR7 823 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 TMEM179Q6ZVK1 233 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 CYP4F22Q6NT55 531 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 GCNAQ96QF7 691 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 ZCCHC11Q5TAX3 1644 aaKnown RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 BAG2O95816 211 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 S100BP04271 92 aaPredicted RBP13.18□□□□□ -0.3
SPG11-201ENST00000261866 EPHB1P54762 984 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 RUFY4Q6ZNE9 571 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 GPR108Q9NPR9 543 aa13.18□□□□□ -0.3
SPG11-201ENST00000261866 PIK3R2O00459 728 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 PLCB1Q9NQ66 1216 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 TBK1Q9UHD2 729 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
SPG11-201ENST00000261866 SMIM24O75264 130 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 PDE1BQ01064 536 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 SLC39A14Q15043 492 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 CPDO75976 1380 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 SLC16A4O15374 487 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 DNAJC24Q6P3W2 148 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 SH2D3AQ9BRG2 576 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 RGS12O14924 1447 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 ASNSP08243 561 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 ANO4Q32M45 955 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 NCAPGQ9BPX3 1015 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 PCP11498 1178 aaKnown RBP13.17□□□□□ -0.3
SPG11-201ENST00000261866 GAP43P17677 238 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
SPG11-201ENST00000261866 STXBP2Q15833 593 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
SPG11-201ENST00000261866 HMGCS2P54868 508 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 IRX4P78413 519 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 TMEM47Q9BQJ4 181 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 OGFRQ9NZT2 677 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
SPG11-201ENST00000261866 EPN1Q9Y6I3 576 aaPredicted RBP13.17□□□□□ -0.3
SPG11-201ENST00000261866 TUBB4BP68371 445 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 KRT33BQ14525 404 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 NFIXQ14938 502 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
SPG11-201ENST00000261866 P3H4Q92791 437 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 MAGOHBQ96A72 148 aaKnown RBP13.16□□□□□ -0.3
SPG11-201ENST00000261866 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
SPG11-201ENST00000261866 FOXP4Q8IVH2 680 aaPredicted RBP13.16□□□□□ -0.3
SPG11-201ENST00000261866 LRRC8AQ8IWT6 810 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 CDC42BPGQ6DT37 1551 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 E9PMD0 336 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 UPP2O95045 317 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 JPH2Q9BR39 696 aaPredicted RBP13.16□□□□□ -0.3
SPG11-201ENST00000261866 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms