RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CDC42EP5Q6NZY7 148 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 SRLQ86TD4 932 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 P2RX7Q99572 595 aaKnown RBP18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 EMILIN3Q9NT22 766 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 PCDHA1Q9Y5I3 950 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 SSU72P8A0A1W2PR75 194 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 KRT18P05783 430 aaKnown RBP18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 PTPROQ16827 1216 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 ZNF572Q7Z3I7 529 aaPredicted RBP18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 TRIM59Q8IWR1 403 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 KCTD10Q9H3F6 313 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 RABEP2Q9H5N1 569 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 FOCADQ5VW36 1801 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 ARFGEF1Q9Y6D6 1849 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 ADAMTSL1Q8N6G6 1762 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 SERPING1P05155 500 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 PAFAH1B1P43034 410 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 PPP1R18Q6NYC8 613 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 CCDC65Q8IXS2 484 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 DNAJC18Q9H819 358 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 KCNQ5Q9NR82 932 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 STIM2Q9P246 746 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 GPATCH4Q5T3I0 446 aaKnown RBP18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 NT5C3AQ9H0P0 336 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 EHD4Q9H223 541 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 ATP6V0A2Q9Y487 856 aa18.03■□□□□ 0.48
TM9SF1-201ENST00000261789 MYH4Q9Y623 1939 aa18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 IVLP07476 585 aa18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 GLI1P08151 1106 aa18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 KCNH2Q12809 1159 aa18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 KIAA0753Q2KHM9 967 aa18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 DNAJC21Q5F1R6 531 aaKnown RBP18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 C8orf74Q6P047 294 aa18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 GOLPH3Q9H4A6 298 aa18.02■□□□□ 0.48
TM9SF1-201ENST00000261789 GOLGA6CA6NDK9 693 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 RBAK-RBAKDNI3L0D1 243 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 RPS6KA5O75582 802 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 GOLGA6DP0CG33 693 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 PABPC4Q13310 644 aaKnown RBP eCLIP18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 PRR16Q569H4 304 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 HYIQ5T013 277 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 TTC19Q6DKK2 380 aaPredicted RBP18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 SEPT12Q8IYM1 358 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 ANO3Q9BYT9 981 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 GOLGA6AQ9NYA3 693 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 EEF2P13639 858 aaKnown RBP18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 GCFC2P16383 781 aaKnown RBP18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 SLC9A1P19634 815 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 EPS15P42566 896 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 ITIH3Q06033 890 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 KLHL30Q0D2K2 578 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 APOBEC3HQ6NTF7 200 aaKnown RBP18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 CATSPER3Q86XQ3 398 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 EDEM3Q9BZQ6 932 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 ZC3H12CQ9C0D7 883 aaKnown RBP18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 KCNMB3Q9NPA1 279 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 SWAP70Q9UH65 585 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 KDM3AQ9Y4C1 1321 aa18.01■□□□□ 0.47
TM9SF1-201ENST00000261789 NR2F2P24468 414 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
TM9SF1-201ENST00000261789 CARSP49589 748 aaKnown RBP18■□□□□ 0.47
TM9SF1-201ENST00000261789 SLC12A3P55017 1021 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 SEPT2Q15019 361 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 TRADDQ15628 312 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 USH1GQ495M9 461 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 FAM76AQ8TAV0 307 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 CEP63Q96MT8 703 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 MEIS2O14770 477 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 FAM153BP0C7A2 387 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 NAB2Q15742 525 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 CDC37Q16543 378 aaPredicted RBP18■□□□□ 0.47
TM9SF1-201ENST00000261789 SLC18A3Q16572 532 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 FAM153CQ494X1 144 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 CFAP221Q4G0U5 840 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 SLC30A10Q6XR72 485 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 RNF10Q8N5U6 811 aaKnown RBP18■□□□□ 0.47
TM9SF1-201ENST00000261789 IFT81Q8WYA0 676 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 COA1Q9GZY4 146 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 FAM153AQ9UHL3 310 aa18■□□□□ 0.47
TM9SF1-201ENST00000261789 FAM170AA1A519 330 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 ARL8AQ96BM9 186 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 GANQ9H2C0 597 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 NFU1Q9UMS0 254 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 SRCAPQ6ZRS2 3230 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 RSPH10B2B2RC85 870 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 HLA-DOAP06340 250 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 RSPH10BP0C881 870 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 GUCY2DQ02846 1103 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 CYP4A11Q02928 519 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 CRAMP1Q96RY5 1269 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 EPB41L5Q9HCM4 733 aa17.99■□□□□ 0.47
TM9SF1-201ENST00000261789 DDTLA6NHG4 134 aaPredicted RBP17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 MYBP10242 640 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 ADRA2BP18089 450 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 HOXD13P35453 343 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 EPHB4P54760 987 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms