RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 DDX25Q9UHL0 483 aaKnown RBP21.02■□□□□ 0.95
COL4A3BP-201ENST00000261415 A0A1B0GVL5 298 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 TESPA1A2RU30 521 aaPredicted RBP21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 VWA3AA6NCI4 1184 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 OR52Z1P0C646 297 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 FOXR1Q6PIV2 292 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 MOXD1Q6UVY6 613 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 CCDC73Q6ZRK6 1079 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 ZNF784Q8NCA9 323 aaPredicted RBP21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 SMCR8Q8TEV9 937 aaPredicted RBP21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 NAT10Q9H0A0 1025 aaKnown RBP21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 CSRNP2Q9H175 543 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 PLXNA1Q9UIW2 1896 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 CYP3A7-CYP3A51PA0A087WV96 503 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 CYP3A4P08684 503 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 CYP3A7P24462 503 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 PRPHP41219 470 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 FSTL1Q12841 308 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 IL17AQ16552 155 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 RESP18Q5W5W9 173 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 GTF3C2Q8WUA4 911 aaPredicted RBP21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 MOV10L1Q9BXT6 1211 aaKnown RBP21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 A1CFQ9NQ94 594 aaKnown RBP21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 ANO10Q9NW15 660 aa21.01■□□□□ 0.95
COL4A3BP-201ENST00000261415 RPTORQ8N122 1335 aa21■□□□□ 0.95
COL4A3BP-201ENST00000261415 MANSC4A6NHS7 340 aaPredicted RBP21■□□□□ 0.95
COL4A3BP-201ENST00000261415 UBXN2AP68543 259 aa21■□□□□ 0.95
COL4A3BP-201ENST00000261415 MAP2K1Q02750 393 aaPredicted RBP21■□□□□ 0.95
COL4A3BP-201ENST00000261415 BAATQ14032 418 aaPredicted RBP21■□□□□ 0.95
COL4A3BP-201ENST00000261415 SPECC1Q5M775 1068 aa21■□□□□ 0.95
COL4A3BP-201ENST00000261415 TRIM65Q6PJ69 517 aa21■□□□□ 0.95
COL4A3BP-201ENST00000261415 LRRC31Q6UY01 552 aa21■□□□□ 0.95
COL4A3BP-201ENST00000261415 MBOAT7Q96N66 472 aa21■□□□□ 0.95
COL4A3BP-201ENST00000261415 FRMPD4Q14CM0 1322 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 ERLIN2O94905 339 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 FAM160A1Q05DH4 1040 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 CALCRLQ16602 461 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 C11orf57Q6ZUT1 292 aaPredicted RBP20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 GOLGA1Q92805 767 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 MTMR9Q96QG7 549 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 CYP39A1Q9NYL5 469 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 FBXO40Q9UH90 709 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 FAM155AB1AL88 458 aaPredicted RBP20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 PFKFB1P16118 471 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 CIITAP33076 1130 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 TXLNAP40222 546 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 NDUFA8P51970 172 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 SETQ01105 290 aaPredicted RBP20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 Q3C1V9 767 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 DTHD1Q6ZMT9 781 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 NCAPG2Q86XI2 1143 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 ENGASEQ8NFI3 743 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 MAF1Q9H063 256 aa20.99■□□□□ 0.95
COL4A3BP-201ENST00000261415 FAM86B1E9PN63 330 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 FAM86B2P0C5J1 330 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 ERVK-9P63128 1117 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 ERVK-24P63145 666 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 DHX40Q8IX18 779 aaKnown RBP20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 HHIPL1Q96JK4 782 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 TAAR1Q96RJ0 339 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 POTEB2H3BUK9 544 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 SLC25A27O95847 323 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 CEP57L1Q8IYX8 460 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 CCDC102AQ96A19 550 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 PARK7Q99497 189 aaKnown RBP20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 PDE11AQ9HCR9 933 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 HPSEQ9Y251 543 aa20.98■□□□□ 0.95
COL4A3BP-201ENST00000261415 MCM3APO60318 1980 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 LRRC37A2A6NM11 1700 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 FAM237AA0A1B0GTK4 181 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 ERCC3P19447 782 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 PPP2R3AQ06190 1150 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 ARMCX5Q6P1M9 558 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 FMR1NBQ8N0W7 255 aaPredicted RBP20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 FAM71BQ8TC56 605 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 LENG9Q96B70 501 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 PURBQ96QR8 312 aaKnown RBP20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 RMDN3Q96TC7 470 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 IGF2BP3O00425 579 aaKnown RBP eCLIP20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 ZSCAN12O43309 604 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 ERLIN1O75477 346 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 COPB2P35606 906 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 ZNF76P36508 570 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 GCLCP48506 637 aaPredicted RBP20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 TUBB4BP68371 445 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 Q4G0T1 1027 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 PRR16Q569H4 304 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 HSP90B2PQ58FF3 399 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 USP49Q70CQ1 688 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 IL31RAQ8NI17 732 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 PXMP2Q9NR77 195 aa20.97■□□□□ 0.95
COL4A3BP-201ENST00000261415 PFASO15067 1338 aa20.96■□□□□ 0.95
COL4A3BP-201ENST00000261415 LONP1P36776 959 aaKnown RBP20.96■□□□□ 0.95
COL4A3BP-201ENST00000261415 ANKRD35Q8N283 1001 aa20.96■□□□□ 0.95
COL4A3BP-201ENST00000261415 CYP2W1Q8TAV3 490 aa20.96■□□□□ 0.95
COL4A3BP-201ENST00000261415 R3HDMLQ9H3Y0 253 aa20.96■□□□□ 0.95
COL4A3BP-201ENST00000261415 IGLV3-22A0A075B6J6 115 aa20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 GOLGA6L9A6NEM1 432 aa20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 EIF2AK2P19525 551 aaKnown RBP20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 TXKP42681 527 aa20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms