RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 LGALS2P05162 132 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 FAAP100Q0VG06 881 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 NFRKBQ6P4R8 1299 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 FAM126BQ8IXS8 530 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 MBOAT7Q96N66 472 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 RRAGDQ9NQL2 400 aaPredicted RBP18.98■□□□□ 0.63
SDCBP-201ENST00000260130 ZMYND8Q9ULU4 1186 aaPredicted RBP18.98■□□□□ 0.63
SDCBP-201ENST00000260130 GSTTP1A0A1W2PQM5 241 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 FAM205CA6NFA0 338 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 MSH4O15457 936 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 SYN1P17600 705 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 TCF7P36402 384 aaPredicted RBP18.98■□□□□ 0.63
SDCBP-201ENST00000260130 PSEN2P49810 448 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 KIAA0753Q2KHM9 967 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 FAM47CQ5HY64 1035 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 CLEC17AQ6ZS10 378 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 PANK2Q9BZ23 570 aa18.98■□□□□ 0.63
SDCBP-201ENST00000260130 H3BRB1 525 aa18.97■□□□□ 0.63
SDCBP-201ENST00000260130 HAS3O00219 553 aa18.97■□□□□ 0.63
SDCBP-201ENST00000260130 TLR3O15455 904 aaKnown RBP18.97■□□□□ 0.63
SDCBP-201ENST00000260130 CLTBP09497 229 aa18.97■□□□□ 0.63
SDCBP-201ENST00000260130 MFSD10Q14728 455 aa18.97■□□□□ 0.63
SDCBP-201ENST00000260130 UTP14CQ5TAP6 766 aaKnown RBP18.97■□□□□ 0.63
SDCBP-201ENST00000260130 PPP4R3AQ6IN85 833 aa18.97■□□□□ 0.63
SDCBP-201ENST00000260130 NAP1L4Q99733 375 aaKnown RBP18.97■□□□□ 0.63
SDCBP-201ENST00000260130 FOXP1Q9H334 677 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-201ENST00000260130 TUT1Q9H6E5 874 aaKnown RBP18.97■□□□□ 0.63
SDCBP-201ENST00000260130 PRKAG2Q9UGJ0 569 aa18.97■□□□□ 0.63
SDCBP-201ENST00000260130 DDX25Q9UHL0 483 aaKnown RBP18.97■□□□□ 0.63
SDCBP-201ENST00000260130 DDX39AO00148 427 aaKnown RBP18.96■□□□□ 0.63
SDCBP-201ENST00000260130 GCFC2P16383 781 aaKnown RBP18.96■□□□□ 0.63
SDCBP-201ENST00000260130 ACTR2P61160 394 aa18.96■□□□□ 0.63
SDCBP-201ENST00000260130 PTPN11Q06124 597 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-201ENST00000260130 PRPF38BQ5VTL8 546 aaKnown RBP18.96■□□□□ 0.63
SDCBP-201ENST00000260130 PPP1R13LQ8WUF5 828 aa18.96■□□□□ 0.63
SDCBP-201ENST00000260130 PRDM5Q9NQX1 630 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-201ENST00000260130 PDLIM7Q9NR12 457 aa18.96■□□□□ 0.63
SDCBP-201ENST00000260130 CCNT1O60563 726 aaKnown RBP18.96■□□□□ 0.63
SDCBP-201ENST00000260130 CD4P01730 458 aa18.96■□□□□ 0.63
SDCBP-201ENST00000260130 SH3RF1Q7Z6J0 888 aa18.96■□□□□ 0.63
SDCBP-201ENST00000260130 TMEM39AQ9NV64 488 aa18.96■□□□□ 0.63
SDCBP-201ENST00000260130 GNL2Q13823 731 aaKnown RBP18.95■□□□□ 0.62
SDCBP-201ENST00000260130 C7orf31Q8N865 590 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 SLC5A5Q92911 643 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 RIT2Q99578 217 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 TRPV6Q9H1D0 765 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 ZNF215Q9UL58 517 aaPredicted RBP18.95■□□□□ 0.62
SDCBP-201ENST00000260130 SCN10AQ9Y5Y9 1956 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 TRIM43BA6NCK2 446 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 B4GALT4O60513 344 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 ATG7O95352 703 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 CCNE2O96020 404 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 SESTD1Q86VW0 696 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 TRIM50Q86XT4 487 aa18.95■□□□□ 0.62
SDCBP-201ENST00000260130 TRIM43Q96BQ3 446 aaPredicted RBP18.95■□□□□ 0.62
SDCBP-201ENST00000260130 DOCK5Q9H7D0 1870 aa18.94■□□□□ 0.62
SDCBP-201ENST00000260130 SLC37A4O43826 429 aa18.94■□□□□ 0.62
SDCBP-201ENST00000260130 SUPT20HL2P0C7V6 817 aa18.94■□□□□ 0.62
SDCBP-201ENST00000260130 INTS4Q96HW7 963 aaKnown RBP18.94■□□□□ 0.62
SDCBP-201ENST00000260130 SMARCAD1Q9H4L7 1026 aa18.94■□□□□ 0.62
SDCBP-201ENST00000260130 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
SDCBP-201ENST00000260130 HDAC6Q9UBN7 1215 aa18.94■□□□□ 0.62
SDCBP-201ENST00000260130 TCEAL9Q9UHQ7 104 aa18.94■□□□□ 0.62
SDCBP-201ENST00000260130 KIAA0355O15063 1070 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 GAS7O60861 476 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 KRT76Q01546 638 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 LRCH2Q5VUJ6 765 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 LARP1BQ659C4 914 aaKnown RBP18.93■□□□□ 0.62
SDCBP-201ENST00000260130 ZNF746Q6NUN9 644 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-201ENST00000260130 NOSTRINQ8IVI9 506 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 ETNPPLQ8TBG4 499 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 GLG1Q92896 1179 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 H3BQV1 296 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 LGR5O75473 907 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 U2AF2P26368 475 aaKnown RBP eCLIP18.93■□□□□ 0.62
SDCBP-201ENST00000260130 ABHD15Q6UXT9 468 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 GJA10Q969M2 543 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 PCYT2Q99447 389 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 TEKT3Q9BXF9 490 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 AZI2Q9H6S1 392 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 GTF2IRD1Q9UHL9 959 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 TBX21Q9UL17 535 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 EMSYQ7Z589 1322 aa18.93■□□□□ 0.62
SDCBP-201ENST00000260130 KIF28PB7ZC32 967 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 PSMD10O75832 226 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 NUCB2P80303 420 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 SMAP1Q8IYB5 467 aaPredicted RBP18.92■□□□□ 0.62
SDCBP-201ENST00000260130 FAM20AQ96MK3 541 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 KCNMB3Q9NPA1 279 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 ERAP1Q9NZ08 941 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 CEP290O15078 2479 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 GDF6Q6KF10 455 aaPredicted RBP18.92■□□□□ 0.62
SDCBP-201ENST00000260130 MIS18BP1Q6P0N0 1132 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 RNPEPQ9H4A4 650 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 PCDH10Q9P2E7 1040 aa18.92■□□□□ 0.62
SDCBP-201ENST00000260130 IGKV6D-21A0A0A0MT36 114 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 TBX3O15119 743 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 RAG1P15918 1043 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 STAT5BP51692 787 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms