RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 OLFML2BQ68BL8 750 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 INPP4AQ96PE3 977 aaPredicted RBP13.59□□□□□ -0.23
NIP7-201ENST00000254940 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 MTRQ99707 1265 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 SH2D3AQ9BRG2 576 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 TRIM5Q9C035 493 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 KATNBL1Q9H079 304 aa13.59□□□□□ -0.23
NIP7-201ENST00000254940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
NIP7-201ENST00000254940 EML1O00423 815 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 GGPS1O95749 300 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 SMPD1P17405 629 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 MDM2Q00987 491 aaPredicted RBP13.58□□□□□ -0.24
NIP7-201ENST00000254940 CYP4A11Q02928 519 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 KARSQ15046 597 aaKnown RBP13.58□□□□□ -0.24
NIP7-201ENST00000254940 BLZF1Q9H2G9 400 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 SAMM50Q9Y512 469 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 GAS7O60861 476 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 INHAP05111 366 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 HOXD10P28358 340 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 CIITAP33076 1130 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
NIP7-201ENST00000254940 BEX3Q00994 111 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 MTFR1Q15390 333 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
NIP7-201ENST00000254940 NLRX1Q86UT6 975 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 ZSCAN30Q86W11 494 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 FAM177A1Q8N128 213 aaPredicted RBP13.58□□□□□ -0.24
NIP7-201ENST00000254940 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 UNC45AQ9H3U1 944 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 ANO10Q9NW15 660 aa13.58□□□□□ -0.24
NIP7-201ENST00000254940 KIAA0100Q14667 2235 aaKnown RBP13.57□□□□□ -0.24
NIP7-201ENST00000254940 ZNF236Q9UL36 1845 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 BECN2A8MW95 431 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 ACTN4O43707 911 aaKnown RBP13.57□□□□□ -0.24
NIP7-201ENST00000254940 CCNE2O96020 404 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 HOXC6P09630 235 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 ZNF865P0CJ78 1059 aaPredicted RBP13.57□□□□□ -0.24
NIP7-201ENST00000254940 TRAPPC10P48553 1259 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 Q4G0T1 1027 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 TRIM50Q86XT4 487 aa13.57□□□□□ -0.24
NIP7-201ENST00000254940 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
NIP7-201ENST00000254940 CYP3A7-CYP3A51PA0A087WV96 503 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 SPATA31C2B4DYI2 1134 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 DYNC1LI2O43237 492 aaPredicted RBP13.56□□□□□ -0.24
NIP7-201ENST00000254940 PGK1P00558 417 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 KCNA2P16389 499 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 CYP3A7P24462 503 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 GRK4P32298 578 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 MFSD14CQ5VZR4 134 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 RGL1Q9NZL6 768 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 CEP131Q9UPN4 1083 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 PTPN22Q9Y2R2 807 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 GOLGA6L19H0YKK7 550 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 DHX15O43143 795 aaKnown RBP13.56□□□□□ -0.24
NIP7-201ENST00000254940 ATP1A3P13637 1013 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 TNFAIP2Q03169 654 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 ARID5BQ14865 1188 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 HSDL1Q3SXM5 330 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 GNPTABQ3T906 1256 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 UTP14CQ5TAP6 766 aaKnown RBP13.56□□□□□ -0.24
NIP7-201ENST00000254940 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 SAMD3Q8N6K7 520 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 MPHOSPH6Q99547 160 aaKnown RBP13.56□□□□□ -0.24
NIP7-201ENST00000254940 MLXIPQ9HAP2 919 aa13.56□□□□□ -0.24
NIP7-201ENST00000254940 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
NIP7-201ENST00000254940 MYADML2A6NDP7 307 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 ZBTB39O15060 712 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
NIP7-201ENST00000254940 POSTNQ15063 836 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 SLC9C1Q4G0N8 1177 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 CEP57L1Q8IYX8 460 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 MBOAT7Q96N66 472 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 ABHD16BQ9H3Z7 469 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 GCFC2P16383 781 aaKnown RBP13.55□□□□□ -0.24
NIP7-201ENST00000254940 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
NIP7-201ENST00000254940 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
NIP7-201ENST00000254940 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 GPRASP2Q96D09 838 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 UNC93B1Q9H1C4 597 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 POLD4Q9HCU8 107 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
NIP7-201ENST00000254940 PCDH10Q9P2E7 1040 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 VAV3Q9UKW4 847 aa13.55□□□□□ -0.24
NIP7-201ENST00000254940 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
NIP7-201ENST00000254940 SYNGAP1Q96PV0 1343 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms