RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 COL4A3BPQ9Y5P4 624 aa11.17□□□□□ -0.62
COPB1-201ENST00000249923 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
COPB1-201ENST00000249923 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
COPB1-201ENST00000249923 FAM26FQ5R3K3 315 aa11.17□□□□□ -0.62
COPB1-201ENST00000249923 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
COPB1-201ENST00000249923 ETNPPLQ8TBG4 499 aa11.17□□□□□ -0.62
COPB1-201ENST00000249923 CUL5Q93034 780 aa11.17□□□□□ -0.62
COPB1-201ENST00000249923 CCDC47Q96A33 483 aaKnown RBP11.17□□□□□ -0.62
COPB1-201ENST00000249923 PCDHA12Q9UN75 941 aa11.17□□□□□ -0.62
COPB1-201ENST00000249923 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
COPB1-201ENST00000249923 ADRA2BP18089 450 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 TRADDQ15628 312 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 OLIG1Q8TAK6 271 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 CRAMP1Q96RY5 1269 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 GANQ9H2C0 597 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 A0A087X0T9 212 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 PLA2G4BP0C869 781 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 FAM228BP0C875 321 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 SPATA31C1P0DKV0 1188 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 ACTN1P12814 892 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 KLRC1P26715 233 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 MARSP56192 900 aaKnown RBP11.16□□□□□ -0.62
COPB1-201ENST00000249923 SPA17Q15506 151 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 FOXR2Q6PJQ5 311 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 GOLGA5Q8TBA6 731 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 GJD4Q96KN9 370 aaPredicted RBP11.16□□□□□ -0.62
COPB1-201ENST00000249923 MBOAT7Q96N66 472 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 TSGA10Q9BZW7 698 aa11.16□□□□□ -0.62
COPB1-201ENST00000249923 LOC102724159A0A0B4J2E5 919 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 FAM86B1E9PN63 330 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 TRAF5O00463 557 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 AKR1B10O60218 316 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 FAM86B2P0C5J1 330 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 PRLRP16471 622 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 FKBP3Q00688 224 aaKnown RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 CKAP4Q07065 602 aaKnown RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 PSMD2Q13200 908 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 PWP2Q15269 919 aaKnown RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 CCDC84Q86UT8 332 aaPredicted RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 CATSPER3Q86XQ3 398 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 CYP2W1Q8TAV3 490 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 RPGRIP1Q96KN7 1286 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 GBP3Q9H0R5 595 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 EHD4Q9H223 541 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 MED4Q9NPJ6 270 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 ATP6V0A2Q9Y487 856 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 MEIS1O00470 390 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 MAGEA1P43355 309 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 CCT5P48643 541 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 KCNA1Q09470 495 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 SP8Q8IXZ3 490 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 LSM14BQ9BX40 385 aaKnown RBP11.15□□□□□ -0.62
COPB1-201ENST00000249923 GOLPH3Q9H4A6 298 aa11.15□□□□□ -0.62
COPB1-201ENST00000249923 SSU72P8A0A1W2PR75 194 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.63
COPB1-201ENST00000249923 RPS6KA5O75582 802 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 TUBBP07437 444 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 GLI1P08151 1106 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.63
COPB1-201ENST00000249923 ATP1A2P50993 1020 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 GPBP1Q86WP2 473 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 COA1Q9GZY4 146 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 CEP72Q9P209 647 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 BCCIPQ9P287 314 aaKnown RBP eCLIP11.15□□□□□ -0.63
COPB1-201ENST00000249923 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.63
COPB1-201ENST00000249923 RSPH10B2B2RC85 870 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 RSPH10BP0C881 870 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 ITIH3Q06033 890 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 TCP10Q12799 353 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 KCTD16Q68DU8 428 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 RBM46Q8TBY0 533 aaKnown RBP11.14□□□□□ -0.63
COPB1-201ENST00000249923 ANO3Q9BYT9 981 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 TANGO6Q9C0B7 1094 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 MYO3BQ8WXR4 1341 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 CYP3A7-CYP3A51PA0A087WV96 503 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 ESYT3A0FGR9 886 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
COPB1-201ENST00000249923 TACC1O75410 805 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 PALMO75781 387 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 FTCDO95954 541 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 FAM153BP0C7A2 387 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 CYP3A7P24462 503 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 FAM153CQ494X1 144 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 FAM153AQ9UHL3 310 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 PCDHA1Q9Y5I3 950 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 PCNTO95613 3336 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 SLC9A1P19634 815 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 PDE6BP35913 854 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 ARID5AQ03989 594 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 GIT2Q14161 759 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 CDC37Q16543 378 aaPredicted RBP11.14□□□□□ -0.63
COPB1-201ENST00000249923 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
COPB1-201ENST00000249923 EPM2AIP1Q7L775 607 aaPredicted RBP11.14□□□□□ -0.63
COPB1-201ENST00000249923 TBC1D5Q92609 795 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms