RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ITGB3BPQ13352 177 aaPredicted RBP14.52□□□□□ -0.09
VPREB3-201ENST00000248948 GPR153Q6NV75 609 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 MOXD1Q6UVY6 613 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 KRT25Q7Z3Z0 450 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 TRIM50Q86XT4 487 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 NECAB1Q8N987 351 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 AFAP1L1Q8TED9 768 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 IL23AQ9NPF7 189 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 SH2B1Q9NRF2 756 aaPredicted RBP14.52□□□□□ -0.09
VPREB3-201ENST00000248948 ERAP1Q9NZ08 941 aa14.52□□□□□ -0.09
VPREB3-201ENST00000248948 MICAL3Q7RTP6 2002 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 LAMA2P24043 3122 aaKnown RBP14.51□□□□□ -0.09
VPREB3-201ENST00000248948 PTPRSQ13332 1948 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 GSTTP1A0A1W2PQM5 241 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 C17orf102A2RUQ5 167 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 IPO5O00410 1097 aaKnown RBP14.51□□□□□ -0.09
VPREB3-201ENST00000248948 LGR5O75473 907 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 SLC34A2O95436 690 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 PARNO95453 639 aaKnown RBP14.51□□□□□ -0.09
VPREB3-201ENST00000248948 SMIM10L2AP0DMW4 78 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 SMIM10L2BP0DMW5 78 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 ST3GAL1Q11201 340 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 PTK7Q13308 1070 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 SHHQ15465 462 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 C9orf50Q5SZB4 431 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 PPP1R13LQ8WUF5 828 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 LENG9Q96B70 501 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 RNPC3Q96LT9 517 aaKnown RBP14.51□□□□□ -0.09
VPREB3-201ENST00000248948 ZSCAN31Q96LW9 406 aaPredicted RBP14.51□□□□□ -0.09
VPREB3-201ENST00000248948 LLPHQ9BRT6 129 aaKnown RBP14.51□□□□□ -0.09
VPREB3-201ENST00000248948 TCEAL9Q9UHQ7 104 aa14.51□□□□□ -0.09
VPREB3-201ENST00000248948 TET1Q8NFU7 2136 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 NRCAMQ92823 1304 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 ST18O60284 1047 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 CAND2O75155 1236 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 GNAT1P11488 350 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
VPREB3-201ENST00000248948 SLC26A2P50443 739 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 ACTR2P61160 394 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 NONOQ15233 471 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPREB3-201ENST00000248948 PRR16Q569H4 304 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 UTP14CQ5TAP6 766 aaKnown RBP14.5□□□□□ -0.09
VPREB3-201ENST00000248948 SERINC5Q86VE9 423 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 TBCKQ8TEA7 893 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 DHX38Q92620 1227 aaKnown RBP14.5□□□□□ -0.09
VPREB3-201ENST00000248948 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPREB3-201ENST00000248948 ZNF577Q9BSK1 485 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 MTIF3Q9H2K0 278 aaKnown RBP14.5□□□□□ -0.09
VPREB3-201ENST00000248948 SMARCAD1Q9H4L7 1026 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 AZI2Q9H6S1 392 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 BRMS1Q9HCU9 246 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 TBC1D22BQ9NU19 505 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 KCNJ14Q9UNX9 436 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 TELO2Q9Y4R8 837 aa14.5□□□□□ -0.09
VPREB3-201ENST00000248948 SOX1O00570 391 aaPredicted RBP14.49□□□□□ -0.09
VPREB3-201ENST00000248948 ATG7O95352 703 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 IQCF3P0C7M6 154 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 CCL23P55773 120 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 KRT76Q01546 638 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 TMEM240Q5SV17 173 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 RASIP1Q5U651 963 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 ZNF746Q6NUN9 644 aaPredicted RBP14.49□□□□□ -0.09
VPREB3-201ENST00000248948 LRRC8DQ7L1W4 858 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 SMAP1Q8IYB5 467 aaPredicted RBP14.49□□□□□ -0.09
VPREB3-201ENST00000248948 RPUSD2Q8IZ73 545 aaKnown RBP14.49□□□□□ -0.09
VPREB3-201ENST00000248948 GLG1Q92896 1179 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 MBOAT7Q96N66 472 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 TBC1D32Q96NH3 1257 aa14.49□□□□□ -0.09
VPREB3-201ENST00000248948 ARID2Q68CP9 1835 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 IGKV6D-21A0A0A0MT36 114 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 CCDC194A0A1B0GVG4 234 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 DHX15O43143 795 aaKnown RBP14.48□□□□□ -0.09
VPREB3-201ENST00000248948 JAK2O60674 1132 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 CCNE2O96020 404 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 RPLP2P05387 115 aaKnown RBP14.48□□□□□ -0.09
VPREB3-201ENST00000248948 SELPP16109 830 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 GCFC2P16383 781 aaKnown RBP14.48□□□□□ -0.09
VPREB3-201ENST00000248948 CYP3A7P24462 503 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 KRT2P35908 639 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 ADAM17P78536 824 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 SMAD3P84022 425 aaKnown RBP14.48□□□□□ -0.09
VPREB3-201ENST00000248948 TRIM29Q14134 588 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 HIC1Q14526 733 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 TRIM71Q2Q1W2 868 aaKnown RBP14.48□□□□□ -0.09
VPREB3-201ENST00000248948 Q4G0T1 1027 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 PLPPR4Q7Z2D5 763 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 LMBR1Q8WVP7 490 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 HERVK_113Q902F9 699 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 TNPO1Q92973 898 aaKnown RBP14.48□□□□□ -0.09
VPREB3-201ENST00000248948 ATP6V0A1Q93050 837 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 SCLYQ96I15 445 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 LRCH3Q96II8 777 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 RIT2Q99578 217 aa14.48□□□□□ -0.09
VPREB3-201ENST00000248948 NAP1L4Q99733 375 aaKnown RBP14.48□□□□□ -0.09
VPREB3-201ENST00000248948 IGSF9BQ9UPX0 1349 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 LOXHD1Q8IVV2 1947 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 EDIL3O43854 480 aa14.47□□□□□ -0.09
VPREB3-201ENST00000248948 MMP1P03956 469 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms