RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 VWCEQ96DN2 955 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 RRP36Q96EU6 259 aaKnown RBP19.69■□□□□ 0.74
HOXC6-201ENST00000243108 NOC4LQ9BVI4 516 aaKnown RBP19.69■□□□□ 0.74
HOXC6-201ENST00000243108 WNT8AQ9H1J5 351 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 TNMDQ9H2S6 317 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 MTMR10Q9NXD2 777 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 V9GY48 417 aaPredicted RBP19.69■□□□□ 0.74
HOXC6-201ENST00000243108 SCN5AQ14524 2016 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 ACRP10323 421 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 SNW1Q13573 536 aaKnown RBP19.68■□□□□ 0.74
HOXC6-201ENST00000243108 PTPAQ15257 358 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 TMEM240Q5SV17 173 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 USP17L6PQ6QN14 398 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 CCDC73Q6ZRK6 1079 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 KAT2BQ92831 832 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 RNPC3Q96LT9 517 aaKnown RBP19.68■□□□□ 0.74
HOXC6-201ENST00000243108 LZTS2Q9BRK4 669 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 PHF20Q9BVI0 1012 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 SEZ6LQ9BYH1 1024 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 HIPK3Q9H422 1215 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 BCAS3Q9H6U6 928 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 FRMPD4Q14CM0 1322 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 PRUNE2Q8WUY3 3088 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 UNC80Q8N2C7 3258 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 MEIS2O14770 477 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 PPP6R2O75170 966 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 CYP2C9P11712 490 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 MRPS9P82933 396 aaKnown RBP19.68■□□□□ 0.74
HOXC6-201ENST00000243108 FAM160A1Q05DH4 1040 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 TRAF1Q13077 416 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 SF3A1Q15459 793 aaKnown RBP19.68■□□□□ 0.74
HOXC6-201ENST00000243108 BRDTQ58F21 947 aaPredicted RBP19.68■□□□□ 0.74
HOXC6-201ENST00000243108 FSIP1Q8NA03 581 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 MRPS27Q92552 414 aaKnown RBP19.68■□□□□ 0.74
HOXC6-201ENST00000243108 PPP1R9BQ96SB3 815 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 MRVI1Q9Y6F6 885 aa19.68■□□□□ 0.74
HOXC6-201ENST00000243108 TRIP12Q14669 1992 aaPredicted RBP19.67■□□□□ 0.74
HOXC6-201ENST00000243108 SORBS3O60504 671 aa19.67■□□□□ 0.74
HOXC6-201ENST00000243108 GNAQP50148 359 aa19.67■□□□□ 0.74
HOXC6-201ENST00000243108 CCL23P55773 120 aa19.67■□□□□ 0.74
HOXC6-201ENST00000243108 AXDND1Q5T1B0 1012 aaPredicted RBP19.67■□□□□ 0.74
HOXC6-201ENST00000243108 EMID1Q96A84 441 aaPredicted RBP19.67■□□□□ 0.74
HOXC6-201ENST00000243108 KPNA6O60684 536 aa19.66■□□□□ 0.74
HOXC6-201ENST00000243108 CCDC192P0DO97 292 aa19.66■□□□□ 0.74
HOXC6-201ENST00000243108 CCDC173Q0VFZ6 552 aa19.66■□□□□ 0.74
HOXC6-201ENST00000243108 PPIGQ13427 754 aaKnown RBP eCLIP19.66■□□□□ 0.74
HOXC6-201ENST00000243108 CAMK4Q16566 473 aa19.66■□□□□ 0.74
HOXC6-201ENST00000243108 FAM109BQ6ICB4 259 aaPredicted RBP19.66■□□□□ 0.74
HOXC6-201ENST00000243108 TMEM199Q8N511 208 aa19.66■□□□□ 0.74
HOXC6-201ENST00000243108 ANP32BQ92688 251 aaKnown RBP19.66■□□□□ 0.74
HOXC6-201ENST00000243108 CTAGE1Q96RT6 745 aa19.66■□□□□ 0.74
HOXC6-201ENST00000243108 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.66■□□□□ 0.74
HOXC6-201ENST00000243108 VPS54Q9P1Q0 977 aa19.66■□□□□ 0.74
HOXC6-201ENST00000243108 RBAK-RBAKDNI3L0D1 243 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 PFKFB3Q16875 520 aaPredicted RBP19.65■□□□□ 0.74
HOXC6-201ENST00000243108 UVSSAQ2YD98 709 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 RILPL1Q5EBL4 403 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 FAM47CQ5HY64 1035 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 RASIP1Q5U651 963 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 NFRKBQ6P4R8 1299 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 ZNF365Q70YC5 407 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 FMR1NBQ8N0W7 255 aaPredicted RBP19.65■□□□□ 0.74
HOXC6-201ENST00000243108 RNF214Q8ND24 703 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 FAM161BQ96MY7 647 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 GUCD1Q96NT3 240 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 CHD7Q9P2D1 2997 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 PIK3CDO00329 1044 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 SCG2P13521 617 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 UBA1P22314 1058 aaKnown RBP19.65■□□□□ 0.74
HOXC6-201ENST00000243108 CCND2P30279 289 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 TOB1P50616 345 aaPredicted RBP19.65■□□□□ 0.74
HOXC6-201ENST00000243108 CHMP4BP1P59074 171 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 SMAD3P84022 425 aaKnown RBP19.65■□□□□ 0.74
HOXC6-201ENST00000243108 SEMA3FQ13275 785 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 NR5A1Q13285 461 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 HSDL1Q3SXM5 330 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 OXER1Q8TDS5 423 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 SCLYQ96I15 445 aa19.65■□□□□ 0.74
HOXC6-201ENST00000243108 SEC63Q9UGP8 760 aaKnown RBP19.65■□□□□ 0.74
HOXC6-201ENST00000243108 CMA1P23946 247 aa19.64■□□□□ 0.73
HOXC6-201ENST00000243108 KRT2P35908 639 aa19.64■□□□□ 0.73
HOXC6-201ENST00000243108 LAMC2Q13753 1193 aa19.64■□□□□ 0.73
HOXC6-201ENST00000243108 NPY5RQ15761 445 aa19.64■□□□□ 0.73
HOXC6-201ENST00000243108 CELF3Q5SZQ8 465 aaKnown RBP19.64■□□□□ 0.73
HOXC6-201ENST00000243108 PPTC7Q8NI37 304 aa19.64■□□□□ 0.73
HOXC6-201ENST00000243108 TTYH1Q9H313 450 aaPredicted RBP19.64■□□□□ 0.73
HOXC6-201ENST00000243108 IL23AQ9NPF7 189 aa19.64■□□□□ 0.73
HOXC6-201ENST00000243108 MORC2Q9Y6X9 1032 aaPredicted RBP19.64■□□□□ 0.73
HOXC6-201ENST00000243108 GBF1Q92538 1859 aa19.64■□□□□ 0.73
HOXC6-201ENST00000243108 TET1Q8NFU7 2136 aa19.63■□□□□ 0.73
HOXC6-201ENST00000243108 TANC1Q9C0D5 1861 aa19.63■□□□□ 0.73
HOXC6-201ENST00000243108 GGPS1O95749 300 aa19.63■□□□□ 0.73
HOXC6-201ENST00000243108 ZNF286BP0CG31 522 aa19.63■□□□□ 0.73
HOXC6-201ENST00000243108 HOXD8P13378 290 aaPredicted RBP19.63■□□□□ 0.73
HOXC6-201ENST00000243108 DHX37Q8IY37 1157 aaKnown RBP19.63■□□□□ 0.73
HOXC6-201ENST00000243108 PDLIM2Q96JY6 352 aa19.63■□□□□ 0.73
HOXC6-201ENST00000243108 CXXC1Q9P0U4 656 aaPredicted RBP19.63■□□□□ 0.73
HOXC6-201ENST00000243108 TELO2Q9Y4R8 837 aa19.63■□□□□ 0.73
HOXC6-201ENST00000243108 KINO60870 393 aaKnown RBP19.62■□□□□ 0.73
HOXC6-201ENST00000243108 TYRO3Q06418 890 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms