RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 KCNF1Q9H3M0 494 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
CXCR4-201ENST00000241393 MAP3K15Q6ZN16 1313 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 FAM95CA0A1B0GW59 222 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 CTAGE5O15320 804 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
CXCR4-201ENST00000241393 GBP1P32455 592 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 EVA1CP58658 441 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 IFIT5Q13325 482 aaKnown RBP9.11□□□□□ -0.95
CXCR4-201ENST00000241393 TTC39AQ5SRH9 613 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 FAM20CQ8IXL6 584 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 CYB5D2Q8WUJ1 264 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 APPBP2Q92624 585 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 UBL7Q96S82 380 aaPredicted RBP9.11□□□□□ -0.95
CXCR4-201ENST00000241393 RCOR1Q9UKL0 485 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 LAMA4Q16363 1823 aa9.11□□□□□ -0.95
CXCR4-201ENST00000241393 PTPDC1A2A3K4 754 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 NTF4P34130 210 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 GATA4P43694 442 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 IMMTQ16891 758 aaKnown RBP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 GORABQ5T7V8 394 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 ZSCAN25Q6NSZ9 544 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 NOP9Q86U38 636 aaKnown RBP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 ZNF396Q96N95 335 aaPredicted RBP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 SPTLC3Q9NUV7 552 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 DACT1Q9NYF0 836 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 DISP2A7MBM2 1401 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 ATRNO75882 1429 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 RGS13O14921 159 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 KLF4O43474 513 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 DHX16O60231 1041 aaKnown RBP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 CTDNEP1O95476 244 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 CHGBP05060 677 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 PDIA3P30101 505 aaKnown RBP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 FAM173BQ6P4H8 233 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 SASS6Q6UVJ0 657 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 ARMCX6Q7L4S7 300 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 CLEC10AQ8IUN9 316 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 BICD2Q8TD16 824 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 FBLIM1Q8WUP2 373 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 HNRNPLLQ8WVV9 542 aaKnown RBP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 OSBP2Q969R2 916 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 MRFAP1L1Q96HT8 127 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 PGBD1Q96JS3 809 aa9.1□□□□□ -0.95
CXCR4-201ENST00000241393 PUS3Q9BZE2 481 aaKnown RBP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.1□□□□□ -0.95
CXCR4-201ENST00000241393 RIC1Q4ADV7 1423 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 CHURC1-FNTBB4DL54 471 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 ERVV-1B6SEH8 477 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 M0R2C6 588 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 NAT2P11245 290 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 CYP7A1P22680 504 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 ETV3P41162 512 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 SLBPQ14493 270 aaKnown RBP eCLIP9.09□□□□□ -0.95
CXCR4-201ENST00000241393 NCAPHQ15003 741 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 TTF1Q15361 905 aaPredicted RBP9.09□□□□□ -0.95
CXCR4-201ENST00000241393 PRAMEF13Q5VWM6 474 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.09□□□□□ -0.95
CXCR4-201ENST00000241393 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 TDRD7Q8NHU6 1098 aaKnown RBP9.09□□□□□ -0.95
CXCR4-201ENST00000241393 PIGBQ92521 554 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 MEGF10Q96KG7 1140 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 SEMA6CQ9H3T2 930 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 ZSWIM4Q9H7M6 989 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 FBRSQ9HAH7 460 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 RIPOR2Q9Y4F9 1068 aa9.09□□□□□ -0.95
CXCR4-201ENST00000241393 BCL9O00512 1426 aa9.09□□□□□ -0.96
CXCR4-201ENST00000241393 MYH15Q9Y2K3 1946 aa9.09□□□□□ -0.96
CXCR4-201ENST00000241393 DYNC1I1O14576 645 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 NFICP08651 508 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 RNF4P78317 190 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 ATP2B3Q16720 1220 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 SGO2Q562F6 1265 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 CDPF1Q6NVV7 123 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 BEND4Q6ZU67 534 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 NLRP10Q86W26 655 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 SMARCC1Q92922 1105 aaPredicted RBP9.08□□□□□ -0.96
CXCR4-201ENST00000241393 DDX11Q96FC9 970 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 COX4I2Q96KJ9 171 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 MAP7D2Q96T17 732 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 PLCH1Q4KWH8 1693 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 LRP5O75197 1615 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 CARMIL3Q8ND23 1372 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 ANKRD36CQ5JPF3 1778 aa9.08□□□□□ -0.96
CXCR4-201ENST00000241393 ANKRD18BA2A2Z9 1011 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 KRBA1A5PL33 1030 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 FOXP2O15409 715 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 ADORA1P30542 326 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 CTSWP56202 376 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 NOLC1Q14978 699 aaKnown RBP eCLIP9.07□□□□□ -0.96
CXCR4-201ENST00000241393 UBE3CQ15386 1083 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 CCDC144BQ3MJ40 725 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 MB21D2Q8IYB1 491 aaPredicted RBP9.07□□□□□ -0.96
CXCR4-201ENST00000241393 TTLL11Q8NHH1 800 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 NCOA7Q8NI08 942 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 LRRC2Q9BYS8 371 aa9.07□□□□□ -0.96
CXCR4-201ENST00000241393 ASAP1Q9ULH1 1129 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms