RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SAMD9Q5K651 1589 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 TOM1L1O75674 476 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 ZNF449Q6P9G9 518 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 THEGQ9P2T0 379 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 ZSCAN20P17040 1043 aaPredicted RBP12.48□□□□□ -0.41
LAMA4-201ENST00000230538 MYO1EQ12965 1108 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 OR6B2Q6IFH4 312 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 DEPDC1BQ8WUY9 529 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 PSPC1Q8WXF1 523 aaKnown RBP12.48□□□□□ -0.41
LAMA4-201ENST00000230538 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 ASAP1Q9ULH1 1129 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 KDM6BO15054 1643 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 LRRD1A4D1F6 860 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 IL6STP40189 918 aaPredicted RBP12.48□□□□□ -0.41
LAMA4-201ENST00000230538 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
LAMA4-201ENST00000230538 LINC00301Q8NCQ3 95 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 TBK1Q9UHD2 729 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 DDIT3P35638 169 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PSMD2Q13200 908 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 TRIM4Q9C037 500 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PARVGQ9HBI0 331 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 SPTLC3Q9NUV7 552 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PRPSAP2O60256 369 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 EIF4A3P38919 411 aaKnown RBP12.47□□□□□ -0.41
LAMA4-201ENST00000230538 DHX9Q08211 1270 aaKnown RBP12.47□□□□□ -0.41
LAMA4-201ENST00000230538 SEPT2Q15019 361 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 LLGL1Q15334 1064 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.47□□□□□ -0.41
LAMA4-201ENST00000230538 LRRC4Q9HBW1 653 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 ERVK-7P63135 1459 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 TTI1O43156 1089 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PLA2G4BP0C869 781 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 ARPP19P56211 112 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 SLC7A5Q01650 507 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 CDR2Q01850 454 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PI16Q6UXB8 463 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PAGE5Q96GU1 130 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 XAB2Q9HCS7 855 aaKnown RBP12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PSAPP07602 524 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 CD58P19256 250 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 UBE2SQ16763 222 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 HSP90AA5PQ58FG0 334 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 HP1BP3Q5SSJ5 553 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-201ENST00000230538 FAM8A1Q9UBU6 413 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 CDC25AP30304 524 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 SLCO1A2P46721 670 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 OSTNP61366 133 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 TMC4Q7Z404 712 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 SERPINB13Q9UIV8 391 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PCDHB6Q9Y5E3 794 aa12.47□□□□□ -0.41
LAMA4-201ENST00000230538 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 RPSAP08865 295 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 HSPA6P17066 643 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 PLCG1P19174 1290 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 FAM133BQ5BKY9 247 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 SPOPLQ6IQ16 392 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 USP17L2Q6R6M4 530 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 SIX6OS1Q8N1H7 587 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 GDAP1Q8TB36 358 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 RNF14Q9UBS8 474 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 RESTQ13127 1097 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 SLMAPQ14BN4 828 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 CNOT10Q9H9A5 744 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 RRP15Q9Y3B9 282 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 APOEP02649 317 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 KRT10P13645 584 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 HEXIM2Q96MH2 286 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 NUDCD1Q96RS6 583 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 SERPINB2P05120 415 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 DMTNQ08495 405 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 VSTM4Q8IW00 320 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 EFCAB13Q8IY85 973 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 PPP1R16BQ96T49 567 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 DRC3Q9H069 523 aa12.46□□□□□ -0.41
LAMA4-201ENST00000230538 SRPRBQ9Y5M8 271 aaKnown RBP12.46□□□□□ -0.41
LAMA4-201ENST00000230538 CTNND1O60716 968 aaKnown RBP12.46□□□□□ -0.42
LAMA4-201ENST00000230538 PLS3P13797 630 aa12.46□□□□□ -0.42
LAMA4-201ENST00000230538 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.42
LAMA4-201ENST00000230538 PCGF5Q86SE9 256 aa12.46□□□□□ -0.42
LAMA4-201ENST00000230538 FGD4Q96M96 766 aa12.46□□□□□ -0.42
LAMA4-201ENST00000230538 FNDC3AQ9Y2H6 1198 aaKnown RBP12.46□□□□□ -0.42
LAMA4-201ENST00000230538 TTC37Q6PGP7 1564 aa12.46□□□□□ -0.42
LAMA4-201ENST00000230538 MAGI3Q5TCQ9 1506 aa12.46□□□□□ -0.42
LAMA4-201ENST00000230538 DNAJC8O75937 253 aaPredicted RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 MXI1P50539 228 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 DR1Q01658 176 aa12.45□□□□□ -0.42
LAMA4-201ENST00000230538 PDCD2Q16342 344 aaPredicted RBP12.45□□□□□ -0.42
LAMA4-201ENST00000230538 EFHD1Q9BUP0 239 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms