RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GTF2IRD1Q9UHL9 959 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 MYH9P35579 1960 aaKnown RBP15.64■□□□□ 0.09
VEGFA-201ENST00000230480 LAMA2P24043 3122 aaKnown RBP15.63■□□□□ 0.09
VEGFA-201ENST00000230480 BTBD18B2RXH4 712 aa15.63■□□□□ 0.09
VEGFA-201ENST00000230480 H3BRB1 525 aa15.63■□□□□ 0.09
VEGFA-201ENST00000230480 SOX1O00570 391 aaPredicted RBP15.63■□□□□ 0.09
VEGFA-201ENST00000230480 TCF7P36402 384 aaPredicted RBP15.63■□□□□ 0.09
VEGFA-201ENST00000230480 SP4Q02446 784 aa15.63■□□□□ 0.09
VEGFA-201ENST00000230480 PTPN11Q06124 597 aaPredicted RBP15.63■□□□□ 0.09
VEGFA-201ENST00000230480 INF2Q27J81 1249 aa15.63■□□□□ 0.09
VEGFA-201ENST00000230480 GALNT17Q6IS24 598 aa15.63■□□□□ 0.09
VEGFA-201ENST00000230480 BICD2Q8TD16 824 aa15.63■□□□□ 0.09
VEGFA-201ENST00000230480 LLPHQ9BRT6 129 aaKnown RBP15.63■□□□□ 0.09
VEGFA-201ENST00000230480 TUT1Q9H6E5 874 aaKnown RBP15.63■□□□□ 0.09
VEGFA-201ENST00000230480 SLC37A4O43826 429 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 MMP1P03956 469 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 FOSBP53539 338 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 ACTR2P61160 394 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 TCTN1Q2MV58 587 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 PRR16Q569H4 304 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 ABHD15Q6UXT9 468 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 SEPT1Q8WYJ6 367 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 SLC5A5Q92911 643 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 CDHR1Q96JP9 859 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 SEZ6LQ9BYH1 1024 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 PPP1R12CQ9BZL4 782 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 EHMT1Q9H9B1 1298 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 SH2B1Q9NRF2 756 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-201ENST00000230480 SLC9A2Q9UBY0 812 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 MROH7Q68CQ1 1323 aa15.62■□□□□ 0.09
VEGFA-201ENST00000230480 EVPLQ92817 2033 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 TANC1Q9C0D5 1861 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 SMIM10L2AP0DMW4 78 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 SMIM10L2BP0DMW5 78 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 CSF2RAP15509 400 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 FXR1P51114 621 aaKnown RBP eCLIP15.61■□□□□ 0.09
VEGFA-201ENST00000230480 GUCY1B3Q02153 619 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 SHHQ15465 462 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 Q4G0T1 1027 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 BRDTQ58F21 947 aaPredicted RBP15.61■□□□□ 0.09
VEGFA-201ENST00000230480 MARCH8Q5T0T0 291 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 UTP14CQ5TAP6 766 aaKnown RBP15.61■□□□□ 0.09
VEGFA-201ENST00000230480 MFSD5Q6N075 450 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 ETNPPLQ8TBG4 499 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 HAS1Q92839 578 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 ZBTB10Q96DT7 871 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 JPH1Q9HDC5 661 aaPredicted RBP15.61■□□□□ 0.09
VEGFA-201ENST00000230480 SIP14410 1827 aa15.61■□□□□ 0.09
VEGFA-201ENST00000230480 KIF28PB7ZC32 967 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 IPO5O00410 1097 aaKnown RBP15.6■□□□□ 0.09
VEGFA-201ENST00000230480 PSMD10O75832 226 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 STBD1O95210 358 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 RAG1P15918 1043 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 RBL2Q08999 1139 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 MBTPS1Q14703 1052 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 FAM47CQ5HY64 1035 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 RASIP1Q5U651 963 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 MOXD1Q6UVY6 613 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 PIK3AP1Q6ZUJ8 805 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 CCDC60Q8IWA6 550 aaPredicted RBP15.6■□□□□ 0.09
VEGFA-201ENST00000230480 GIMAP8Q8ND71 665 aaPredicted RBP15.6■□□□□ 0.09
VEGFA-201ENST00000230480 SCLYQ96I15 445 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 SETD4Q9NVD3 440 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 PTPRSQ13332 1948 aa15.6■□□□□ 0.09
VEGFA-201ENST00000230480 DDX39AO00148 427 aaKnown RBP15.59■□□□□ 0.09
VEGFA-201ENST00000230480 TREHO43280 583 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 ZNF76P36508 570 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 CCL23P55773 120 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 CHMP4BP1P59074 171 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 NONOQ15233 471 aaKnown RBP eCLIP15.59■□□□□ 0.095e-6■□□□□ 9.8
VEGFA-201ENST00000230480 PTGISQ16647 500 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 KRT25Q7Z3Z0 450 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 SERINC5Q86VE9 423 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 DIS3L2Q8IYB7 885 aaKnown RBP15.59■□□□□ 0.09
VEGFA-201ENST00000230480 FBXO18Q8NFZ0 1043 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.092e-12■■■□□ 14.6
VEGFA-201ENST00000230480 UBE2OQ9C0C9 1292 aaKnown RBP15.59■□□□□ 0.09
VEGFA-201ENST00000230480 HIPK3Q9H422 1215 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 KCNMB3Q9NPA1 279 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 EMSYQ7Z589 1322 aa15.59■□□□□ 0.09
VEGFA-201ENST00000230480 LOXHD1Q8IVV2 1947 aa15.58■□□□□ 0.09
VEGFA-201ENST00000230480 ZBTB42B2RXF5 422 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 NOP56O00567 594 aaKnown RBP15.58■□□□□ 0.08
VEGFA-201ENST00000230480 TLR3O15455 904 aaKnown RBP15.58■□□□□ 0.08
VEGFA-201ENST00000230480 ZNF862O60290 1169 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 ACRP10323 421 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 CUL4AQ13619 759 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 PLCB4Q15147 1175 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 TMEM240Q5SV17 173 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 PPP4R3AQ6IN85 833 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 LMBR1Q8WVP7 490 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 WASF1Q92558 559 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 ZNF577Q9BSK1 485 aa15.58■□□□□ 0.08
VEGFA-201ENST00000230480 A0A1W2PPC1 479 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 MBLAC1A4D2B0 266 aaPredicted RBP15.57■□□□□ 0.08
VEGFA-201ENST00000230480 EML1O00423 815 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 IQCF3P0C7M6 154 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 SUPT20HL2P0C7V6 817 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 KRT2P35908 639 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms