RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDCA3-201ENST00000229265 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
CDCA3-201ENST00000229265 CPVLQ9H3G5 476 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 TTC12Q9H892 705 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-201ENST00000229265 PRR12Q9ULL5 1215 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 PFASO15067 1338 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 ABCB11O95342 1321 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 A0A1B0GTH6 734 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 SPDYE3A6NKU9 549 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 EDIL3O43854 480 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 MARCH6O60337 910 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 KIF20AO95235 890 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 SGPL1O95470 568 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 DSG3P32926 999 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 SREBF1P36956 1147 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 TXKP42681 527 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 PRMT2P55345 433 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 PRPF38BQ5VTL8 546 aaKnown RBP11.92□□□□□ -0.5
CDCA3-201ENST00000229265 LHX8Q68G74 356 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 MCF2L2Q86YR7 1114 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 VSTM4Q8IW00 320 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 RASSF8Q8NHQ8 419 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 ERMNQ8TAM6 284 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 PXYLP1Q8TE99 480 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 IQCDQ96DY2 449 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 CDK5RAP3Q96JB5 506 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 FGD4Q96M96 766 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 MTRQ99707 1265 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 THAP9Q9H5L6 903 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 KCNMB3Q9NPA1 279 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 LIMA1Q9UHB6 759 aaKnown RBP11.92□□□□□ -0.5
CDCA3-201ENST00000229265 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 ADAMTS5Q9UNA0 930 aa11.92□□□□□ -0.5
CDCA3-201ENST00000229265 PSMA7O14818 248 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 WDR46O15213 610 aaKnown RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 EEF1GP26641 437 aaKnown RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 CYP2C19P33261 490 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 PAK1Q13153 545 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 TBX2Q13207 712 aaPredicted RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 KARSQ15046 597 aaKnown RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 SPECC1LQ69YQ0 1117 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 ISM2Q6H9L7 571 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 PLEKHH3Q7Z736 793 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 FAM114A1Q8IWE2 563 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 CACTINQ8WUQ7 758 aaKnown RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 LENG1Q96BZ8 264 aaPredicted RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 CCDC51Q96ER9 411 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 MMTAG2Q9BU76 263 aaKnown RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 TMEM106CQ9BVX2 250 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 ANO3Q9BYT9 981 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 TRIM9Q9C026 710 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 TMX1Q9H3N1 280 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 TMEM260Q9NX78 707 aa11.91□□□□□ -0.5
CDCA3-201ENST00000229265 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
CDCA3-201ENST00000229265 TRIOBPQ9H2D6 2365 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 GCOM1H8Y6P7 765 aaPredicted RBP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 KLRC4O43908 158 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 STX10O60499 249 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 SLC34A2O95436 690 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 POLR2MP0CAP2 368 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 SKILP12757 684 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 PLCG1P19174 1290 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 ERCC3P19447 782 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 SFPQP23246 707 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 HOXD10P28358 340 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 ARHGAP4P98171 946 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 IKQ13123 557 aaPredicted RBP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 TRIM14Q14142 442 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 GRB14Q14449 540 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 TPD52L1Q16890 204 aaPredicted RBP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 TMEM119Q4V9L6 283 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 HAUS3Q68CZ6 603 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 UNC13DQ70J99 1090 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 HAS1Q92839 578 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 PAWRQ96IZ0 340 aaKnown RBP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 NAA15Q9BXJ9 866 aaKnown RBP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 TANGO6Q9C0B7 1094 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 PRO3102Q9H379 93 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 KCNF1Q9H3M0 494 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 ZNF214Q9UL59 606 aaPredicted RBP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 PAXBP1Q9Y5B6 917 aa11.9□□□□□ -0.5
CDCA3-201ENST00000229265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDCA3-201ENST00000229265 ASTN1O14525 1302 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 ITIH6Q6UXX5 1313 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 ADCY6O43306 1168 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 HMGCRP04035 888 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 PGK2P07205 417 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 TPM2P07951 284 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 CCNE1P24864 410 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 GRB10Q13322 594 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms