RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SERINC5Q86VE9 423 aa16.24■□□□□ 0.19
GPN3-201ENST00000228827 MAFAQ8NHW3 353 aaPredicted RBP16.24■□□□□ 0.19
GPN3-201ENST00000228827 SLC28A3Q9HAS3 691 aa16.24■□□□□ 0.19
GPN3-201ENST00000228827 C6orf50Q9HD87 102 aa16.24■□□□□ 0.19
GPN3-201ENST00000228827 MAFGO15525 162 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 CTSHP09668 335 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 HOXC8P31273 242 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 SREBF1P36956 1147 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 TCTN1Q2MV58 587 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 CEP55Q53EZ4 464 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 CCDC12Q8WUD4 166 aaPredicted RBP16.23■□□□□ 0.19
GPN3-201ENST00000228827 GLG1Q92896 1179 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 UIMC1Q96RL1 719 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 PRDM12Q9H4Q4 367 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 JPH1Q9HDC5 661 aaPredicted RBP16.23■□□□□ 0.19
GPN3-201ENST00000228827 PDRG1Q9NUG6 133 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 SLC9A2Q9UBY0 812 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 COL6A3P12111 3177 aa16.23■□□□□ 0.19
GPN3-201ENST00000228827 RSPH10B2B2RC85 870 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 PARNO95453 639 aaKnown RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 CXCL10P02778 98 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 RSPH10BP0C881 870 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 GNAT1P11488 350 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 IFNAR1P17181 557 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 EVCP57679 992 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 ITGB3BPQ13352 177 aaPredicted RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 MBTPS1Q14703 1052 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 CNKSR3Q6P9H4 555 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 TEX2Q8IWB9 1127 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 RASGRP4Q8TDF6 673 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 SLC9A7Q96T83 725 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 SDF4Q9BRK5 362 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 ZMYND12Q9H0C1 365 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 AGO4Q9HCK5 861 aaKnown RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 VPS54Q9P1Q0 977 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 PCDHA11Q9Y5I1 949 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 ESYT2A0FGR8 921 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 DDX39AO00148 427 aaKnown RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 BAIAP3O94812 1187 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 KCNJ6P48051 423 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 WDR5P61964 334 aaKnown RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 PPP2R2DQ66LE6 453 aa16.22■□□□□ 0.19
GPN3-201ENST00000228827 TMCO2Q7Z6W1 182 aaPredicted RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
GPN3-201ENST00000228827 TANC1Q9C0D5 1861 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 MYH7BA7E2Y1 1941 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 SCN5AQ14524 2016 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 FAM86B1E9PN63 330 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 MEIS1O00470 390 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 CPLX1O14810 134 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 FAM86B2P0C5J1 330 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 GNA11P29992 359 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 ACTR2P61160 394 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 SSRP1Q08945 709 aaKnown RBP16.21■□□□□ 0.19
GPN3-201ENST00000228827 PPFIA1Q13136 1202 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 PLA2G4DQ86XP0 818 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 PHOSPHO2Q8TCD6 241 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 PCYT2Q99447 389 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 GAS2L1Q99501 681 aaPredicted RBP16.21■□□□□ 0.19
GPN3-201ENST00000228827 SMARCAD1Q9H4L7 1026 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.19
GPN3-201ENST00000228827 NFASCO94856 1347 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 NRCAMQ92823 1304 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 LGR5O75473 907 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 CA3P07451 260 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 IGBP1P78318 339 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 ADAM17P78536 824 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 DEFB103AP81534 67 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 GRIK4Q16099 956 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 RUFY4Q6ZNE9 571 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 CCDC148Q8NFR7 591 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 ZNF274Q96GC6 653 aaPredicted RBP16.2■□□□□ 0.18
GPN3-201ENST00000228827 AZI2Q9H6S1 392 aa16.2■□□□□ 0.18
GPN3-201ENST00000228827 CYP3A4P08684 503 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 NLRP5P59047 1200 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 IKBKEQ14164 716 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 DBF4BQ8NFT6 615 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 BICD2Q8TD16 824 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 ZBTB10Q96DT7 871 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 OSBPL7Q9BZF2 842 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 CERS4Q9HA82 394 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 EMSYQ7Z589 1322 aa16.19■□□□□ 0.18
GPN3-201ENST00000228827 DOCK5Q9H7D0 1870 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 IGLV3-22A0A075B6J6 115 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 ABHD14A-ACY1A0A1B0GW23 586 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 TLL1O43897 1013 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 ARHGEF15O94989 841 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 CCNE2O96020 404 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 IGFBP4P22692 258 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 NIPA1Q7RTP0 329 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.18■□□□□ 0.18
GPN3-201ENST00000228827 CRYGNQ8WXF5 182 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 PPM1EQ8WY54 764 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms