RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 SEC16BQ96JE7 1060 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 CEP63Q96MT8 703 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 CPVLQ9H3G5 476 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 ESYT2A0FGR8 921 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 KLRF2D3W0D1 207 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 KIF1CO43896 1103 aaKnown RBP16.96■□□□□ 0.3
VTN-201ENST00000226218 GOLGA8HP0CJ92 632 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 TMOD1P28289 359 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 CTNNA1P35221 906 aaKnown RBP16.96■□□□□ 0.3
VTN-201ENST00000226218 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 CYB5D1Q6P9G0 228 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 DDX42Q86XP3 938 aaKnown RBP eCLIP16.96■□□□□ 0.3
VTN-201ENST00000226218 RAPGEF5Q92565 580 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 ADAMTS1Q9UHI8 967 aa16.96■□□□□ 0.3
VTN-201ENST00000226218 DDX60LQ5H9U9 1706 aaKnown RBP16.95■□□□□ 0.3
VTN-201ENST00000226218 KCNK3O14649 394 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 FLT3P36888 993 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
VTN-201ENST00000226218 COASYQ13057 564 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 XRCC4Q13426 336 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 ARMC9Q7Z3E5 817 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 PARP9Q8IXQ6 854 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 TAF4BQ92750 862 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 SGSM3Q96HU1 749 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 CCDC114Q96M63 670 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 FBXL5Q9UKA1 691 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 NENFQ9UMX5 172 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
VTN-201ENST00000226218 GOLGA6L7A0A1B0GV03 622 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 SLC37A4O43826 429 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 RDXP35241 583 aaKnown RBP16.94■□□□□ 0.3
VTN-201ENST00000226218 KLHL30Q0D2K2 578 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 MTMR3Q13615 1198 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 RAPGEF1Q13905 1077 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 PDIA5Q14554 519 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 SNCBQ16143 134 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 CALCRLQ16602 461 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 C10orf76Q5T2E6 689 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 TAX1BP1Q86VP1 789 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 RASGEF1CQ8N431 466 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 LRRC27Q9C0I9 530 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 TMCO5BA8MYB1 307 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 SART1O43290 800 aaKnown RBP16.94■□□□□ 0.3
VTN-201ENST00000226218 GNA14O95837 355 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 TSPY3P0CV98 308 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 TSPY8P0CW00 308 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 ELF1P32519 619 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 SCTRP47872 440 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 ASIC2Q16515 512 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 P3H4Q92791 437 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 CEP83Q9Y592 693 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 PCDHA2Q9Y5H9 948 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 NHSQ6T4R5 1651 aa16.94■□□□□ 0.3
VTN-201ENST00000226218 SBF2Q86WG5 1849 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 POTEMA6NI47 508 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CCDC188H7C350 402 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 TRAF5O00463 557 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 GHRP10912 638 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 SMARCA1P28370 1054 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 ECM1Q16610 540 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 IRF2BP2Q7Z5L9 587 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 TMC3Q7Z5M5 1100 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CCT6BQ92526 530 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
VTN-201ENST00000226218 CDK5RAP3Q96JB5 506 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.93■□□□□ 0.3
VTN-201ENST00000226218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.93■□□□□ 0.3
VTN-201ENST00000226218 FGFBP2Q9BYJ0 223 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CENPHQ9H3R5 247 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 TMEM260Q9NX78 707 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 BIN2Q9UBW5 565 aaPredicted RBP16.93■□□□□ 0.3
VTN-201ENST00000226218 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
VTN-201ENST00000226218 SUFUQ9UMX1 484 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 STXBP5LQ9Y2K9 1186 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 NOC2LQ9Y3T9 749 aaKnown RBP16.93■□□□□ 0.3
VTN-201ENST00000226218 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 DCDC2CA8MYV0 355 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 PGRMC1O00264 195 aaKnown RBP16.93■□□□□ 0.3
VTN-201ENST00000226218 DNAJC8O75937 253 aaPredicted RBP16.93■□□□□ 0.3
VTN-201ENST00000226218 PDHBP11177 359 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 RASA1P20936 1047 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 DRD4P21917 467 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CDR1P51861 262 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 SEPT2Q15019 361 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 ERFEQ4G0M1 354 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 SLFN11Q7Z7L1 901 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CCDC50Q8IVM0 306 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 REXO1Q8N1G1 1221 aaKnown RBP16.93■□□□□ 0.3
VTN-201ENST00000226218 METTL13Q8N6R0 699 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 SNX29Q8TEQ0 813 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 TLCD1Q96CP7 247 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 TXLNGYQ9BZA5 131 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 HAUS2Q9NVX0 235 aa16.93■□□□□ 0.3
VTN-201ENST00000226218 CEP104O60308 925 aa16.92■□□□□ 0.3
VTN-201ENST00000226218 MRPL12P52815 198 aaKnown RBP16.92■□□□□ 0.3
VTN-201ENST00000226218 POU5F1Q01860 360 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms