RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 BSDC1Q9NW68 430 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ZNF212Q9UDV6 495 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 CA4P22748 312 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 CMA1P23946 247 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 BASP1P80723 227 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ME3Q16798 604 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 LRRC8CQ8TDW0 803 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 SNX19Q92543 992 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 SH3KBP1Q96B97 665 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 HACD3Q9P035 362 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 HNRNPCL2B2RXH8 293 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 HNRNPCL1O60812 293 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 PHEXP78562 749 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 GPSM2P81274 684 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 PCGF5Q86SE9 256 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 DYNLL2Q96FJ2 89 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ACAP3Q96P50 834 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 SUDS3Q9H7L9 328 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 RAVER2Q9HCJ3 691 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 TTI1O43156 1089 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ADRA2BP18089 450 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 CDK8P49336 464 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ARL4DP49703 201 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 TAF11Q15544 211 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 NAA35Q5VZE5 725 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 FRA10AC1Q70Z53 315 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 UHMK1Q8TAS1 419 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 IFT43Q96FT9 208 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 GPR101Q96P66 508 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 GCOM2Q9BZD3 368 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 TDRD3Q9H7E2 651 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 MAP3K20Q9NYL2 800 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 DOLKQ9UPQ8 538 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 PTPN22Q9Y2R2 807 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 FIS1Q9Y3D6 152 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 PAMP19021 973 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 MTMR1Q13613 665 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 TRIM42Q8IWZ5 723 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 LZICQ8WZA0 190 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 MAGOHBQ96A72 148 aaKnown RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 Q9H521 79 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 UBE2TQ9NPD8 197 aaPredicted RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 LRRD1A4D1F6 860 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 ASB14A6NK59 587 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 EEF1GP26641 437 aaKnown RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 INPP5BP32019 993 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 CACNB3P54284 484 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 UBE2SQ16763 222 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 ZNF827Q17R98 1081 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 FAM83BQ5T0W9 1011 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 SPATA1Q5VX52 437 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 TRIM67Q6ZTA4 783 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 MCPH1Q8NEM0 835 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 CLDN3O15551 220 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 PAPOLAP51003 745 aaKnown RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 YWHAHQ04917 246 aaPredicted RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 SPP2Q13103 211 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 LRRC41Q15345 812 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 ZFYVE28Q9HCC9 887 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 ZBED1O96006 694 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 ARHGAP25P42331 645 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 MECOMQ03112 1051 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 WHAMMP3Q1A5X7 153 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 ERICH1Q86X53 443 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 POTEDQ86YR6 584 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 CFAP61Q8NHU2 1237 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 SRPK1Q96SB4 655 aaKnown RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 XPO4Q9C0E2 1151 aaKnown RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 NGRNQ9NPE2 291 aaKnown RBP11.38□□□□□ -0.59
TRPS1-201ENST00000220888 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
TRPS1-201ENST00000220888 TMCC1O94876 653 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 BAG2O95816 211 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 CYBBP04839 570 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 SNAP25P60880 206 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 CDO1Q16878 200 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 ZNF568Q3ZCX4 644 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 TTC19Q6DKK2 380 aaPredicted RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 SRRM1Q8IYB3 904 aaKnown RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 EDEM3Q9BZQ6 932 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 FOXP1Q9H334 677 aaPredicted RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 TRIM45Q9H8W5 580 aaPredicted RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 ABCC12Q96J65 1359 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 ADCY9O60503 1353 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 PEX3P56589 373 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 DCAF4L1Q3SXM0 396 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 SGO2Q562F6 1265 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 ACRBPQ8NEB7 543 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms