RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 RNF180Q86T96 592 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 KRI1Q8N9T8 703 aaKnown RBP14.83□□□□□ -0.04
TIMP1-201ENST00000218388 ERMNQ8TAM6 284 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 SEPT1Q8WYJ6 367 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 GJA10Q969M2 543 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 LENG1Q96BZ8 264 aaPredicted RBP14.83□□□□□ -0.04
TIMP1-201ENST00000218388 TMEM106CQ9BVX2 250 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 UNC45AQ9H3U1 944 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 VAV3Q9UKW4 847 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 VWA3AA6NCI4 1184 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 PSAPP07602 524 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 MMP3P08254 477 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 MARCKSP29966 332 aaPredicted RBP14.82□□□□□ -0.04
TIMP1-201ENST00000218388 LONP1P36776 959 aaKnown RBP14.82□□□□□ -0.04
TIMP1-201ENST00000218388 ME1P48163 572 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 NKX3-2P78367 333 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 DGKDQ16760 1214 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 TMEM63BQ5T3F8 832 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 HAUS3Q68CZ6 603 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 PCSK9Q8NBP7 692 aaKnown RBP14.82□□□□□ -0.04
TIMP1-201ENST00000218388 ARRDC4Q8NCT1 418 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 AFG1LQ8WV93 481 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 LEO1Q8WVC0 666 aaPredicted RBP14.82□□□□□ -0.04
TIMP1-201ENST00000218388 AK8Q96MA6 479 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 DEFB118Q96PH6 123 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 GBP4Q96PP9 640 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 GPR20Q99678 358 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 DISC1Q9NRI5 854 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 LRWD1Q9UFC0 647 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 RCOR1Q9UKL0 485 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 PCDHA10Q9Y5I2 948 aa14.82□□□□□ -0.04
TIMP1-201ENST00000218388 SRPRBQ9Y5M8 271 aaKnown RBP14.82□□□□□ -0.04
TIMP1-201ENST00000218388 A6NJR5 290 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 KPNA6O60684 536 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 DKC1O60832 514 aaKnown RBP eCLIP14.81□□□□□ -0.04
TIMP1-201ENST00000218388 PPFIA4O75335 1185 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 CCNE2O96020 404 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 PGK1P00558 417 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 GJB1P08034 283 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 CST5P28325 142 aaPredicted RBP14.81□□□□□ -0.04
TIMP1-201ENST00000218388 TCF7P36402 384 aaPredicted RBP14.81□□□□□ -0.04
TIMP1-201ENST00000218388 EPHA7Q15375 998 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 HSDL1Q3SXM5 330 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 GNASQ5JWF2 1037 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 FAM160B1Q5W0V3 765 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 LHX8Q68G74 356 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 B3GNT9Q6UX72 402 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 NEK9Q8TD19 979 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 AZI2Q9H6S1 392 aa14.81□□□□□ -0.04
TIMP1-201ENST00000218388 FBXO2Q9UK22 296 aaPredicted RBP14.81□□□□□ -0.04
TIMP1-201ENST00000218388 POTEMA6NI47 508 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 KBTBD13C9JR72 458 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 BACH1O14867 736 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 CUTAO60888 179 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 ADAMTS4O75173 837 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 ATG7O95352 703 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
TIMP1-201ENST00000218388 SUPT20HL2P0C7V6 817 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 TXLNAP40222 546 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 SPIRE1Q08AE8 756 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 KRT79Q5XKE5 535 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 IGSF22Q8N9C0 903 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 ATP6V0A1Q93050 837 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 TSEN34Q9BSV6 310 aaKnown RBP14.8□□□□□ -0.04
TIMP1-201ENST00000218388 BCAS3Q9H6U6 928 aa14.8□□□□□ -0.04
TIMP1-201ENST00000218388 ZNF215Q9UL58 517 aaPredicted RBP14.8□□□□□ -0.04
TIMP1-201ENST00000218388 GSTTP1A0A1W2PQM5 241 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 GOLGA6L4A6NEF3 574 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 MOXD2PA6NHM9 499 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 GOLGA6L22H0YM25 854 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 SLC26A4O43511 780 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 SGPL1O95470 568 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 TFRCP02786 760 aaKnown RBP14.79□□□□□ -0.04
TIMP1-201ENST00000218388 P4HBP07237 508 aaKnown RBP14.79□□□□□ -0.04
TIMP1-201ENST00000218388 HOXD8P13378 290 aaPredicted RBP14.79□□□□□ -0.04
TIMP1-201ENST00000218388 PTGS1P23219 599 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 MYH9P35579 1960 aaKnown RBP14.79□□□□□ -0.04
TIMP1-201ENST00000218388 LRRC41Q15345 812 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 IL17AQ16552 155 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 ABHD15Q6UXT9 468 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 EMSYQ7Z589 1322 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
TIMP1-201ENST00000218388 KLHDC9Q8NEP7 349 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 U2AF1L4Q8WU68 220 aaKnown RBP14.79□□□□□ -0.04
TIMP1-201ENST00000218388 GLG1Q92896 1179 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 CHAMP1Q96JM3 812 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 KATNAL1Q9BW62 490 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 SMARCAD1Q9H4L7 1026 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 ZNF302Q9NR11 478 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 OGDHLQ9ULD0 1010 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 KDM3AQ9Y4C1 1321 aa14.79□□□□□ -0.04
TIMP1-201ENST00000218388 EML1O00423 815 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 DNM1LO00429 736 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 LGR5O75473 907 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 CABYRO75952 493 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 LGALS2P05162 132 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 MYL3P08590 195 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 MUTP22033 750 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 UBA7P41226 1012 aa14.78□□□□□ -0.04
TIMP1-201ENST00000218388 GJA8P48165 433 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms