RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 UBA1P22314 1058 aaKnown RBP11.18□□□□□ -0.62
RTCB-201ENST00000216038 UBA7P41226 1012 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 TRIM32Q13049 653 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
RTCB-201ENST00000216038 TAPT1Q6NXT6 567 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 LRSAM1Q6UWE0 723 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
RTCB-201ENST00000216038 RASSF8Q8NHQ8 419 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 ERO1AQ96HE7 468 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 TEKT3Q9BXF9 490 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 KATNBL1Q9H079 304 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 SRRDQ9UH36 339 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 SAMM50Q9Y512 469 aa11.18□□□□□ -0.62
RTCB-201ENST00000216038 MORC2Q9Y6X9 1032 aaPredicted RBP11.18□□□□□ -0.62
RTCB-201ENST00000216038 SYNGAP1Q96PV0 1343 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 WDR81Q562E7 1941 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 POLR2DO15514 142 aaKnown RBP11.17□□□□□ -0.62
RTCB-201ENST00000216038 MAFGO15525 162 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 CCNE2O96020 404 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 CBX1P83916 185 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 CYP4A11Q02928 519 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 PDIA5Q14554 519 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 CCDC144BQ3MJ40 725 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 CCDC73Q6ZRK6 1079 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
RTCB-201ENST00000216038 SNX29Q8TEQ0 813 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 LENG1Q96BZ8 264 aaPredicted RBP11.17□□□□□ -0.62
RTCB-201ENST00000216038 CDHR1Q96JP9 859 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 RIT2Q99578 217 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 SDF4Q9BRK5 362 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 MMTAG2Q9BU76 263 aaKnown RBP11.17□□□□□ -0.62
RTCB-201ENST00000216038 RAB34Q9BZG1 259 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 DACT1Q9NYF0 836 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 KCNH3Q9ULD8 1083 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
RTCB-201ENST00000216038 ADCY6O43306 1168 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 GGPS1O95749 300 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 ICAM3P32942 547 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 SNW1Q13573 536 aaKnown RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 ECM1Q16610 540 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 CABP7Q86V35 215 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 RAET1EQ8TD07 263 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 SCFD2Q8WU76 684 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 JPH1Q9HDC5 661 aaPredicted RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 VTA1Q9NP79 307 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 TBC1D22BQ9NU19 505 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 DDX41Q9UJV9 622 aaKnown RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 LOC102724159A0A0B4J2E5 919 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 CDK11BP21127 795 aaKnown RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 HOXD10P28358 340 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 CCT6AP40227 531 aaKnown RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 SYKP43405 635 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 FAM193AP78312 1265 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 FAM160A1Q05DH4 1040 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 PPP2R5CQ13362 524 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 TTLL4Q14679 1199 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 PWP2Q15269 919 aaKnown RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 CAMK4Q16566 473 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 KRT79Q5XKE5 535 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 OLFML2BQ68BL8 750 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 CAVIN1Q6NZI2 390 aaKnown RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 CCDC62Q6P9F0 684 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 MIER3Q7Z3K6 550 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 FMR1NBQ8N0W7 255 aaPredicted RBP11.16□□□□□ -0.62
RTCB-201ENST00000216038 DHX58Q96C10 678 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 AK8Q96MA6 479 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 MLXIPQ9HAP2 919 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 SLC9A2Q9UBY0 812 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 TCEAL9Q9UHQ7 104 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
RTCB-201ENST00000216038 MYH9P35579 1960 aaKnown RBP11.15□□□□□ -0.62
RTCB-201ENST00000216038 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 ADCY3O60266 1144 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 MED24O75448 989 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
RTCB-201ENST00000216038 ZNF202O95125 648 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 TGFB3P10600 412 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 TXLNAP40222 546 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 CTTNQ14247 550 aaKnown RBP11.15□□□□□ -0.62
RTCB-201ENST00000216038 LONRF3Q496Y0 759 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 DNTTIP2Q5QJE6 756 aaKnown RBP11.15□□□□□ -0.62
RTCB-201ENST00000216038 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 B3GNT9Q6UX72 402 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 DHX37Q8IY37 1157 aaKnown RBP11.15□□□□□ -0.62
RTCB-201ENST00000216038 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.62
RTCB-201ENST00000216038 BANK1Q8NDB2 785 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 TRPV1Q8NER1 839 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 ENGASEQ8NFI3 743 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 LRRC15Q8TF66 581 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 SENP7Q9BQF6 1050 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 EIF2AK1Q9BQI3 630 aaKnown RBP11.15□□□□□ -0.62
RTCB-201ENST00000216038 DISC1Q9NRI5 854 aa11.15□□□□□ -0.62
RTCB-201ENST00000216038 CCDC66A2RUB6 948 aa11.14□□□□□ -0.63
RTCB-201ENST00000216038 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms