RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Mtmr10Q7TPM9 771 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dmtf1Q8CE22 761 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tshz3Q8CGV9 1081 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Clstn3Q99JH7 956 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Pramef12Q9D2F1 463 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Galntl5Q9D4M9 431 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cnpy3Q9DAU1 276 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 FibpQ9JI19 357 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nudt5Q9JKX6 218 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gabbr1Q9WV18 960 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cntnap5cQ0V8T7 1305 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dcpp3L7N259 170 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cyp27b1O35084 507 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cer1O55233 272 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tdo2P48776 406 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Col9a2Q07643 688 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Bpifa6Q0VGU8 367 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 DhpsQ3TXU5 369 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ap5z1Q3U829 807 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gm11487Q5RIS0 354 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Srd5a1Q68FF9 255 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Wdr44Q6NVE8 915 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Smarcc2Q6PDG5 1213 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Casc1Q6TDU8 730 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 PicalmQ7M6Y3 660 aaKnown RBP9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Triml1Q8BVP1 470 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 VcpkmtQ8C436 228 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Glis1Q8K1M4 789 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Adgrg3Q8R0T6 542 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tbc1d13Q8R3D1 400 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cog6Q8R3I3 657 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ubac1Q8VDI7 409 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Havcr2Q8VIM0 281 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Slc15a2Q9ES07 729 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Habp4Q9JKS5 411 aaKnown RBP9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gpaa1Q9WTK3 621 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Mtmr9Q9Z2D0 545 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Chd7A2AJK6 2986 aaKnown RBP9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 CenpfE9Q3P4 2997 aaKnown RBP9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Plxna4Q80UG2 1893 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gm11549A0A286YD83 63 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gm13941A2AJ38 245 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gm3252E9PUT9 216 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gm3468E9QAJ8 216 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 AampJ3QN89 436 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Il2rbP16297 539 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Traf3ip1Q149C2 625 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ccdc102aQ3TMW1 549 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ccdc125Q5U465 500 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Icam5Q60625 917 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tbc1d1Q60949 1255 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tfe3Q64092 572 aaKnown RBP9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dusp11Q6NXK5 321 aaKnown RBP9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ccdc82Q6PG04 518 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Kcnk18Q6VV64 394 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Daam2Q80U19 1115 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ccdc158Q8CDI6 1109 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Sept8Q8CHH9 429 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 DymQ8CHY3 669 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dnm1lQ8K1M6 742 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Unc5aQ8K1S4 898 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Tceanc2Q8R2M0 207 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Kif18aQ91WD7 886 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 F11Q91Y47 624 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Odf2lQ9D478 642 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Pold3Q9EQ28 462 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Msl3Q9WVG9 525 aa9.25□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dhx8A2A4P0 1244 aaKnown RBP9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ankrd16A2AS55 361 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Kpna6O35345 536 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Pdia3P27773 505 aaKnown RBP9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nkx1-2P42580 305 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cnnm3Q32NY4 713 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gpd2Q64521 727 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Inppl1Q6P549 1257 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ush1gQ80T11 461 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ago3Q8CJF9 860 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Paf1Q8K2T8 535 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ushbp1Q8R370 680 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Smco2Q9DA21 347 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Slc5a4aQ9ET37 656 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Dnajb7Q9QYI8 312 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Pmfbp1Q9WVQ0 1022 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Psmd10Q9Z2X2 231 aa9.24□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cacna1hO88427 2365 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ccdc78D3Z5T1 437 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Vmn2r23E9PXI5 849 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 MthfslL7N466 203 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Znf326O88291 580 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ube2zQ3UE37 356 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Uimc1Q5U5Q9 727 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 FcgrtQ61559 365 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Colgalt2Q6NVG7 625 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Eif4bQ8BGD9 611 aaKnown RBP9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Grik4Q8BMF5 956 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Clec1aQ8BWY2 269 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Rint1Q8BZ36 792 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Colgalt1Q8K297 617 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 FcrlaQ920A9 352 aa9.23□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cul5Q9D5V5 780 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms