RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Plekhf1Q3TB82 279 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Psmd1Q3TXS7 953 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Mpp4Q6P7F1 635 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Myef2Q8C854 591 aaKnown RBP16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Lrit1Q8K099 624 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 4921530L21RikQ9CQ47 274 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Rilpl1Q9JJC6 406 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Aox3G3X982 1335 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Naaladl2A0A0N4SUJ3 795 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 MypopQ8R4U1 393 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Rpusd2Q149F1 553 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Acad11Q80XL6 779 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Nrbp2Q91V36 499 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Msantd4Q91YU3 345 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Herc3A6H6S0 1050 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ppp2r5eQ61151 467 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Olfr832Q7TRG9 312 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Pdzph1Q8BGR1 1238 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Mtmr4Q91XS1 1190 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gimd1E9PW74 217 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Kcnb1Q03717 857 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Vps41Q5KU39 853 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ccdc125Q5U465 500 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Irak1Q62406 710 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Efcab14Q8BGQ6 484 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Znf467Q8JZL0 594 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Bag2Q91YN9 210 aa16.87■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Speer4f2E9Q366 295 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Krt86P97861 486 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Rab34Q64008 259 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Retreg2Q6NS82 541 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Trp53inp1Q9QXE4 239 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ppfia4B8QI36 1187 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Tcp10bE9PYJ0 438 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 PtgdrP70263 357 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Eps8l1Q8R5F8 716 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Sec23aQ01405 765 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Tnni3kQ5GIG6 834 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 NntQ61941 1086 aaKnown RBP16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 F13a1Q8BH61 732 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Dr1Q91WV0 176 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Col14a1Q80X19 1797 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ccdc24E9PUW8 296 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 CaluO35887 315 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Grin3bQ91ZU9 1003 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 EpgnQ924X1 152 aa16.86■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Slit1Q80TR4 1531 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm11985A0A1B0GS61 206 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm14525B1AZA0 212 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm2012B1B0R1 212 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm4841E9QAA8 417 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ccdc160Q3UYG1 323 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm14819Q62478 212 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 NfrkbQ6PIJ4 1296 aaKnown RBP16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Fermt3Q8K1B8 665 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Atp2a1Q8R429 994 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 SmapQ9R0P4 181 aaKnown RBP16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm6583E9Q8Z1 469 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ap1m1P35585 423 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Pde1bQ01065 535 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Cep126Q0VBV7 1103 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm5168Q4KL04 211 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Fam183bQ5NC57 135 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 ZyxQ62523 564 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Cnot10Q8BH15 744 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ccdc87Q8CDL9 855 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Golga1Q9CW79 758 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Vps33aQ9D2N9 598 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ankrd2Q9WV06 328 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Irx2P81066 474 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Rsad1Q5SUV1 442 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Rasa3Q60790 834 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ptpn23Q6PB44 1692 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 OatP29758 439 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Fam207aP58468 219 aaKnown RBP16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Tigd5Q499M4 642 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 LdhdQ7TNG8 484 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Pspc1Q8R326 523 aaKnown RBP16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Klc4Q9DBS5 619 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Eif2ak1Q9Z2R9 619 aa16.85■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Kcnh2O35219 1162 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 FerP70451 823 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Nsun2Q1HFZ0 757 aaKnown RBP16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ccdc92bQ5SUE3 299 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Adgrg6Q6F3F9 1165 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Fem1bQ9Z2G0 627 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ubr1O70481 1757 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Cacna2d2Q6PHS9 1154 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Serpinb13Q8CDC0 389 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Sh2b1Q91ZM2 756 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 4933428M09RikQ9D3X3 192 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Cep83Q9D5R3 692 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Cbx8Q9QXV1 362 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Tmem132bF7BAB2 1078 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Rtkn2Q14B46 604 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Acot6Q32Q92 419 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Apobec3Q99J72 440 aaKnown RBP16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Shank2Q80Z38 1476 aa16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Atxn2lQ7TQH0 1049 aaKnown RBP16.84■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Spc24Q9D083 201 aa16.84■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms