RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Dpcr1Q3TNW5 500 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Muc3aQ3U5A2 218 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Herc4Q6PAV2 1057 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Foxo6Q70KY4 559 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 R3hdm2Q80TM6 1044 aaKnown RBP14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Znf526Q8BI66 675 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Drd5Q8BLD9 478 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 CgasQ8C6L5 507 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ccdc87Q8CDL9 855 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ces1Q8VCC2 565 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Psmd2Q8VDM4 908 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Slc12a6Q924N4 1150 aa14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Luc7lQ9CYI4 371 aaKnown RBP14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Add1Q9QYC0 735 aaKnown RBP14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 AdnpQ9Z103 1108 aaKnown RBP14.72□□□□□ -0.05
Nup88-201ENSMUST00000035283 Nr1i3O35627 358 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ncf2O70145 525 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Orc4O88708 433 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Tspyl3Q3UYP3 334 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 E2f5Q61502 335 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Clca4aQ6Q473 924 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Celf4Q7TSY6 486 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ythdf3Q8BYK6 585 aaKnown RBP14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Cdan1Q8CC12 1239 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Slc44a4Q91VA1 707 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gps2Q921N8 327 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 ArpinQ9D0A3 226 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Jag1Q9QXX0 1218 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ddx25Q9QY15 484 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Pacsin2Q9WVE8 486 aaKnown RBP14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Nfxl1E9Q8I7 918 aaKnown RBP14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Mroh9G5E8L9 891 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Rfpl4bJ3QPR6 266 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 TyrobpO54885 114 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Pja1O55176 578 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 NfixP70257 488 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Rbm46P86049 533 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Sox13Q04891 613 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Krt35Q497I4 455 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Phactr4Q501J7 694 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 KaznQ69ZS8 779 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Ddx19bQ8BZY3 494 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 AagabQ8R2R3 316 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Kif17Q99PW8 1038 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Sf3a3Q9D554 501 aaKnown RBP14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Gm5114W4VSN8 858 aa14.71□□□□□ -0.05
Nup88-201ENSMUST00000035283 Mast2Q60592 1734 aa14.71□□□□□ -0.06
Nup88-201ENSMUST00000035283 1700016G14RikA0A286YCZ6 238 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Gm13023A2A8N2 498 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Fam71aB7XG49 585 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Zfp174B9EJW5 407 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Xirp1O70373 1129 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 LdhaP06151 332 aaKnown RBP14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Mcl1P97287 331 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Trip13Q3UA06 432 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Lilrb4Q64281 335 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Dnm1lQ8K1M6 742 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Slc35f6Q8VE96 372 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Pcdha5Q91Y15 934 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Rabl3Q9D4V7 236 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Akap8Q9DBR0 687 aaKnown RBP14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Stk11Q9WTK7 436 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 DexiQ9WUQ7 95 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Scn4aQ9ER60 1841 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Osbpl9A2A8Z1 736 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Armc3A2AU72 881 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ttc38A3KMP2 465 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Nova2D3YVV7 556 aaKnown RBP14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Cacna2d1O08532 1103 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Kcnu1O54982 1121 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 FechP22315 420 aaKnown RBP14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Stat3P42227 770 aaKnown RBP14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Spg7Q3ULF4 781 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ppp1r1bQ60829 194 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Nr2e1Q64104 385 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Krt9Q6RHW0 743 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Scfd2Q8BTY8 684 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Q91Z58 1206 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Psma8Q9CWH6 250 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ankrd2Q9WV06 328 aa14.7□□□□□ -0.06
Nup88-201ENSMUST00000035283 Lamb1P02469 1786 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 A0A286YCQ6 122 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Vmn2r79E9Q067 851 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Trappc3O55013 180 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Pgrmc1O55022 195 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 VimP20152 466 aaKnown RBP14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Serpina1bP22599 413 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Nsun7Q14AW5 724 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 TraddQ3U0V2 310 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Hdac10Q6P3E7 666 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 RalylQ8BTF8 293 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Hps4Q99KG7 671 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 UvssaQ9D479 717 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Klrc1Q9Z202 244 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Klc1O88447 541 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Nr2f2P43135 414 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Polr2fP61219 127 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 MagohP61327 146 aaKnown RBP14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ppp4cP97470 307 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ttbk2Q3UVR3 1243 aa14.69□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms