RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ccdc34Q3UI66 367 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Peg10Q7TN75 958 aaKnown RBP14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Snip1Q8BIZ6 383 aaKnown RBP14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gpr180Q8BPS4 441 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Usp15Q8R5H1 981 aa14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Mrpl11Q9CQF0 192 aaKnown RBP14□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Spocd1B1ASB6 936 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Zc3h7bF8VPP8 982 aaKnown RBP13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Mapk6Q61532 720 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Tldc1Q8K0P3 455 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Trex1Q91XB0 314 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ddx25Q9QY15 484 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Trim10Q9WUH5 489 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Cetn3O35648 167 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Tcp1P11983 556 aaKnown RBP13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Hps5P59438 1126 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ogfod1Q3U0K8 545 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ribc1Q9D0B8 379 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Pabpc6Q9D4E6 643 aaKnown RBP13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Sertad2Q9JJG5 309 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Angptl3Q9R182 455 aa13.99□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gad1P48318 593 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Capza3P70190 299 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Sema3eP70275 775 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Trim43aQ3TL54 445 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ankrd13cQ3UX43 541 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Igf2bp2Q5SF07 592 aaKnown RBP13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Phf20Q8BLG0 1010 aaKnown RBP13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Tbc1d10cQ8C9V1 444 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Nol7Q9D7Z3 254 aaKnown RBP13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Sh2b2Q9JID9 621 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 DonsonQ9QXP4 560 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Phtf1Q9QZ09 761 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 A0A286YCQ6 122 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gjb6P70689 261 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Pls1Q3V0K9 630 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gas8Q60779 478 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Grik5Q61626 979 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Dhx37Q6NZL1 1150 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Kif2bQ8C0N1 668 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Dusp19Q8K4T5 220 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gtpbp4Q99ME9 634 aaKnown RBP13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Eya4Q9Z191 616 aa13.98□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Dnajc21E9Q8D0 531 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Hoxa11P31311 313 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Tcerg1lQ3B807 590 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ces1eQ64176 562 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ago4Q8CJF8 861 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gm4907B1AXB9 411 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Barx2O08686 283 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Mcm5P49718 733 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Zhx1P70121 873 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Evi5P97366 809 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Zc3h18Q0P678 948 aaKnown RBP13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Arglu1Q3UL36 271 aaKnown RBP13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 D630036H23RikQ3UQD6 204 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Krt9Q6RHW0 743 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Adcy3Q8VHH7 1145 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Dnajc17Q91WT4 303 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Chrna2Q91X60 512 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Coa7Q921H9 231 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Tmem132aQ922P8 1018 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Q9DAQ4 598 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 BcamQ9R069 622 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Peg12Q9WVA7 283 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Fam205aA2APU8 1308 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ankrd35E9Q9D8 996 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Rnf207Q3V3A7 635 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Dph1Q5NCQ5 438 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ccdc157Q5SPX1 718 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Atp13a3Q5XF89 1219 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ezh2Q61188 746 aaKnown RBP13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Pank4Q80YV4 820 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 P2ry10Q8BFU7 328 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 MyripQ8K3I4 856 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Prpf6Q91YR7 941 aaKnown RBP13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Lrp2bpQ9D4C6 346 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Spata17Q9D552 379 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 2310002L09RikQ9D7L5 217 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Myl7Q9QVP4 175 aa13.97□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ccdc88cQ6VGS5 2009 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Atrnl1Q6A051 1378 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Gm28919A0A087WP35 240 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ppp2r5cQ60996 524 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Kif5bQ61768 963 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Epha7Q61772 998 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ccpg1Q640L3 753 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Churc1Q6DG52 112 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Actn1Q7TPR4 892 aaKnown RBP13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Ddx10Q80Y44 875 aaKnown RBP13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 CbsQ91WT9 561 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Q91Z58 1206 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Tmem79Q9D709 391 aa13.96□□□□□ -0.17
Rnf4-201ENSMUST00000030992 Wdr70Q3TWF6 657 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ttll12Q3UDE2 639 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Scarf1Q5ND28 820 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 HrQ61645 1182 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Six2Q62232 296 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Fhod1Q6P9Q4 1197 aa13.96□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Usp17leQ7M764 540 aa13.96□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms