RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Znf287Q9EQB9 759 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Gm5737A0A140LI11 423 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Zfp984A2A7A2 547 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Kcnu1O54982 1121 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Lrig2Q52KR2 1054 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Scnn1aQ61180 699 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Il17cQ8K4C5 194 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Lgi2Q8K4Z0 550 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Arfgap2Q99K28 520 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Kif17Q99PW8 1038 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Nol7Q9D7Z3 254 aaKnown RBP20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Tjp2Q9Z0U1 1167 aaKnown RBP20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Mtcl1Q3UHU5 1945 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Dnai2A2AC93 623 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Dnaaf5B9EJR8 853 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 XlrP05531 208 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Nap1l1P28656 391 aaKnown RBP20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Psmc2P46471 433 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Dpcr1Q3TNW5 500 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 SlmapQ3URD3 845 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ptger2Q62053 362 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Hdac10Q6P3E7 666 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Usp17leQ7M764 540 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Oxnad1Q8VE38 311 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Q91Z58 1206 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Galnt15Q9D2N8 638 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Col1a1P11087 1453 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Usp17lbE9Q9U0 468 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Gja5Q01231 358 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Acsbg2Q2XU92 667 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Bola2Q8BGS2 86 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 AopepQ8BXQ6 817 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 MslnlQ8C160 685 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 F11Q91Y47 624 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Angptl3Q9R182 455 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ppfia4B8QI36 1187 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 DgkiD3YWQ0 1071 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 C2cd2E9Q3C1 696 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Nfxl1E9Q8I7 918 aaKnown RBP20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Bbof1Q3V079 533 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 IgflQ6B9Z0 140 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Znf18Q810A1 556 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Dusp19Q8K4T5 220 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Tesk2Q8VCT9 570 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Dqx1Q924H9 718 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ddx47Q9CWX9 455 aaKnown RBP20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Fam187aQ9D3R5 417 aa20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Usp14Q9JMA1 493 aaKnown RBP20.2■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Lbhd1A0A087WPA0 259 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 GabreA2AMW3 916 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Tnfrsf11aO35305 625 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Specc1Q5SXY1 1067 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Hoxa13Q62424 386 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 GnptabQ69ZN6 1235 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Adcy2Q80TL1 1090 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Klhl7Q8BUL5 586 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Osbpl1aQ91XL9 950 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Tfr2Q9JKX3 798 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Nfu1Q9QZ23 255 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Pex11aQ9Z211 246 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Adam7O35227 789 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Brip1Q5SXJ3 1174 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Gas8Q60779 478 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ccpg1Q640L3 753 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Fam177a1Q8BR63 207 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Yars2Q8BYL4 472 aaKnown RBP20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Calhm4Q8CE93 315 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Slc5a5Q99PN0 618 aa20.19■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Sept2P42208 361 aaKnown RBP20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Mcl1P97287 331 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Agxt2Q3UEG6 513 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Grik5Q61626 979 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Krt36B1AQ75 473 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Pgrmc1O55022 195 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Epb41l4aP52963 686 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Surf6P70279 355 aaKnown RBP20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Dcaf17Q3TUL7 519 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Krt35Q497I4 455 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ccdc181Q80ZU5 509 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Rnf187Q8BFX1 236 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Mboat7Q8CHK3 473 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Sgms1Q8VCQ6 419 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 PccaQ91ZA3 724 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Rnf34Q99KR6 376 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Lrp2bpQ9D4C6 346 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ccdc83Q9D4V3 305 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Q9D5Q8 446 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Mtmr2Q9Z2D1 643 aa20.18■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 A0A286YCQ6 122 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Zc3h18Q0P678 948 aaKnown RBP20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Gdpd4Q3TT99 632 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ankrd13dQ6PD24 605 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 R3hdm2Q80TM6 1044 aaKnown RBP20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ift74Q8BKE9 600 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Gtf3c5Q8R2T8 520 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Vwa5aQ99KC8 793 aaKnown RBP20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Xirp1O70373 1129 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Atp6v1aP50516 617 aaKnown RBP20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Spout1Q3UHX9 385 aaKnown RBP20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 WaplQ65Z40 1200 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms