RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 AdnpQ9Z103 1108 aaKnown RBP13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Gm3893E9Q1I1 302 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Kcnh2O35219 1162 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 ProcP33587 460 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nr2f2P43135 414 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Psmc2P46471 433 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tex11Q14AT2 947 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fgd5Q80UZ0 1219 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 3830417A13RikQ8BQJ2 303 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ddx19bQ8BZY3 494 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ccdc28aQ8CEI3 192 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Vwa5aQ99KC8 793 aaKnown RBP13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dnajc19Q9CQV7 116 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Prpf40aQ9R1C7 953 aaKnown RBP13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 VillQ91YD6 859 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fmnl1Q9JL26 1094 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Polr2fP61219 127 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tex35Q14BK3 207 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Znf697Q569E7 569 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cyfip2Q5SQX6 1253 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Gramd4Q8CB44 633 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 IntS13Q8QZV7 732 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 PigoQ9JJI6 1093 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Usp14Q9JMA1 493 aaKnown RBP13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 ArcQ9WV31 396 aa13.16□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Osbpl9A2A8Z1 736 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Zfp174B9EJW5 407 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nova2D3YVV7 556 aaKnown RBP13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tal1P22091 329 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Trip13Q3UA06 432 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Q6PD19 689 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Actn1Q7TPR4 892 aaKnown RBP13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Lca5Q80ST9 704 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dr1Q91WV0 176 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Slc26a4Q9R155 780 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cog1Q9Z160 980 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nedd4P46935 887 aaKnown RBP13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tmod1P49813 359 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Gdf10P97737 476 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 CgasQ8C6L5 507 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 GanQ8CA72 597 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Rbm41Q8JZV4 413 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Bzw2Q91VK1 419 aaKnown RBP13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cul5Q9D5V5 780 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tmem191cQ9JJB1 302 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cacna2d3Q9Z1L5 1091 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ap1b1O35643 943 aaKnown RBP13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 H2afzP0C0S6 128 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tagap1P0CAX8 505 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 EgfrQ01279 1210 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 H2afvQ3THW5 128 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fgfr1opQ66JX5 399 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Gle1Q8R322 699 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Slc35f6Q8VE96 372 aa13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fam133bQ9CVI2 245 aaKnown RBP13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 RnmtQ9D0L8 465 aaKnown RBP13.15□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ttc38A3KMP2 465 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Krt15Q61414 452 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Rbm26Q6NZN0 1012 aaKnown RBP13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 HhatQ8BMT9 499 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Abcf2Q99LE6 628 aaKnown RBP13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Sh3tc1G3X9F6 1346 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Gna14P30677 355 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Ggt6Q6PDE7 497 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Olfr832Q7TRG9 312 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Bud13Q8R149 637 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Lrrc42Q8R2U7 421 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Orc1Q9Z1N2 840 aaKnown RBP13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Vmn2r68L7N2B3 851 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Atp6v0a2P15920 856 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Atp6v1aP50516 617 aaKnown RBP13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Sema3eP70275 775 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Gga2Q6P5E6 603 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Thap3Q8BJ25 218 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Srp68Q8BMA6 625 aaKnown RBP13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Ythdf3Q8BYK6 585 aaKnown RBP13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 PccaQ91ZA3 724 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Q9D5Q8 446 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Slc5a4aQ9ET37 656 aa13.14□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Fam207aP58468 219 aaKnown RBP13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Ppp4cP97470 307 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Kndc1Q0KK55 1742 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Fbxw10Q5SUS0 1030 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Haus6Q6NV99 933 aaKnown RBP13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Ppp2r2aQ6P1F6 447 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Ccdc25Q78PG9 208 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Ces1Q8VCC2 565 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Synpo2Q91YE8 1087 aaKnown RBP13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Becn2P0DM65 447 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Myo1fP70248 1099 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 RelaQ04207 549 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Nsun7Q14AW5 724 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Fam178bQ24JP3 464 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 1700109H08RikQ9D9C0 210 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Kif5cP28738 956 aaKnown RBP13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Lilrb3P97484 841 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Lrrc36Q3V0M2 755 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Acad11Q80XL6 779 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Mxra8Q9DBV4 442 aa13.13□□□□□ -0.31
Rfx1-201ENSMUST00000005600 Rfpl4bJ3QPR6 266 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms